RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 CYP26A1O43174 497 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 SYNCRIPO60506 623 aaKnown RBP13.5□□□□□ -0.25
TMEM54-206ENST00000482771 CILPO75339 1184 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 VNN1O95497 513 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 ATXN1LP0C7T5 689 aaKnown RBP13.5□□□□□ -0.25
TMEM54-206ENST00000482771 ACO1P21399 889 aaKnown RBP13.5□□□□□ -0.25
TMEM54-206ENST00000482771 CASP1P29466 404 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 OXTRP30559 389 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 MATKP42679 507 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 TPMTP51580 245 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 NDST1P52848 882 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 AP3M2P53677 418 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 BNC1Q01954 994 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 STK38Q15208 465 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 SGSM1Q2NKQ1 1148 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 CNNM4Q6P4Q7 775 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 TMPRSS7Q7RTY8 843 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 GPRIN1Q7Z2K8 1008 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 MARCH9Q86YJ5 346 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 IQUBQ8NA54 791 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 PARD3BQ8TEW8 1205 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 SIPA1Q96FS4 1042 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 NUP58Q9BVL2 599 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 CUEDC2Q9H467 287 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 UPF2Q9HAU5 1272 aaKnown RBP13.5□□□□□ -0.25
TMEM54-206ENST00000482771 TM7SF3Q9NS93 570 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 FAM49BQ9NUQ9 324 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.5□□□□□ -0.25
TMEM54-206ENST00000482771 USP36Q9P275 1121 aaKnown RBP13.5□□□□□ -0.25
TMEM54-206ENST00000482771 CGNQ9P2M7 1197 aaKnown RBP13.5□□□□□ -0.25
TMEM54-206ENST00000482771 THAP10Q9P2Z0 257 aaPredicted RBP13.5□□□□□ -0.25
TMEM54-206ENST00000482771 HMGXB4Q9UGU5 601 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 EIF2B4Q9UI10 523 aaKnown RBP13.5□□□□□ -0.25
TMEM54-206ENST00000482771 NFE2L3Q9Y4A8 694 aa13.5□□□□□ -0.25
TMEM54-206ENST00000482771 SMG1Q96Q15 3661 aaKnown RBP13.5□□□□□ -0.25
TMEM54-206ENST00000482771 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.49□□□□□ -0.25
TMEM54-206ENST00000482771 GOLGA8CPA6NN73 597 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 LRRIQ3A6PVS8 624 aaPredicted RBP13.49□□□□□ -0.25
TMEM54-206ENST00000482771 HHLA1C9JL84 531 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 STC2O76061 302 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 KLKB1P03952 638 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 FAM200BP0CF97 657 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 P4HA1P13674 534 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 IL12RB1P42701 662 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 CLDN10P78369 228 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 GEN1Q17RS7 908 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 KNOP1Q1ED39 458 aaKnown RBP13.49□□□□□ -0.25
TMEM54-206ENST00000482771 KLHDC10Q6PID8 442 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 IL27RAQ6UWB1 636 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 Q6ZNB5 142 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 DBX2Q6ZNG2 339 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 UNC13DQ70J99 1090 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 UNC93AQ86WB7 457 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 C12orf56Q8IXR9 622 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 LINC00301Q8NCQ3 95 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 UCMAQ8WVF2 138 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 PRCCQ92733 491 aaPredicted RBP13.49□□□□□ -0.25
TMEM54-206ENST00000482771 CYFIP2Q96F07 1278 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 BLZF1Q9H2G9 400 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 TFIP11Q9UBB9 837 aaKnown RBP13.49□□□□□ -0.25
TMEM54-206ENST00000482771 NAGPAQ9UK23 515 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 FNDC3AQ9Y2H6 1198 aaKnown RBP13.49□□□□□ -0.25
TMEM54-206ENST00000482771 SLC27A6Q9Y2P4 619 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 GTF3C3Q9Y5Q9 886 aa13.49□□□□□ -0.25
TMEM54-206ENST00000482771 UBE4BO95155 1302 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 A0A1B0GVT2 93 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 TRABD2BA6NFA1 517 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 NPC1O15118 1278 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 SPTLC2O15270 562 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 CER1O95813 267 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 RPN1P04843 607 aaKnown RBP13.48□□□□□ -0.25
TMEM54-206ENST00000482771 HMBSP08397 361 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 ZNF883P0CG24 379 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 ACADMP11310 421 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 NASPP49321 788 aaPredicted RBP13.48□□□□□ -0.25
TMEM54-206ENST00000482771 CSNK1EP49674 416 aaKnown RBP13.48□□□□□ -0.25
TMEM54-206ENST00000482771 ZNF132P52740 706 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 MFAP3P55082 362 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 DLG4P78352 724 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 EHHADHQ08426 723 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 CYP4F3Q08477 520 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 SUZ12Q15022 739 aaKnown RBP13.48□□□□□ -0.25
TMEM54-206ENST00000482771 SPOPLQ6IQ16 392 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 CLEC20AQ6ZU45 233 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 SCD5Q86SK9 330 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 FAM124AQ86V42 546 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 BBC3Q96PG8 261 aaPredicted RBP13.48□□□□□ -0.25
TMEM54-206ENST00000482771 HNRNPABQ99729 332 aaKnown RBP13.48□□□□□ -0.25
TMEM54-206ENST00000482771 CDC6Q99741 560 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 ELOVL2Q9NXB9 296 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 TOR4AQ9NXH8 423 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 MTMR6Q9Y217 621 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 ZNF510Q9Y2H8 683 aa13.48□□□□□ -0.25
TMEM54-206ENST00000482771 HELZ2Q9BYK8 2649 aaKnown RBP13.48□□□□□ -0.25
TMEM54-206ENST00000482771 EIF4E1BA6NMX2 242 aaKnown RBP13.47□□□□□ -0.25
TMEM54-206ENST00000482771 KIF20AO95235 890 aa13.47□□□□□ -0.25
TMEM54-206ENST00000482771 PENKP01210 267 aaPredicted RBP13.47□□□□□ -0.25
TMEM54-206ENST00000482771 RALAP11233 206 aa13.47□□□□□ -0.25
TMEM54-206ENST00000482771 CHKAP35790 457 aa13.47□□□□□ -0.25
TMEM54-206ENST00000482771 KIF11P52732 1056 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms