RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 AKT3Q9Y243 479 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 VWA5AO00534 786 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 TRAFD1O14545 582 aaPredicted RBP13.13□□□□□ -0.31
VPS52-218ENST00000482399 HNRNPRO43390 633 aaKnown RBP13.13□□□□□ -0.31
VPS52-218ENST00000482399 PGGT1BP53609 377 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 GBE1Q04446 702 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 Q3C1V9 767 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 SFT2D3Q587I9 215 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 NET1Q7Z628 596 aaPredicted RBP13.13□□□□□ -0.31
VPS52-218ENST00000482399 C10orf107Q8IVU9 208 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 TMEM192Q8IY95 271 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 CNKSR2Q8WXI2 1034 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 OPTNQ96CV9 577 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 OLFM3Q96PB7 478 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 TWNKQ96RR1 684 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 B3GNT5Q9BYG0 378 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 ETNK2Q9NVF9 386 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 THAP1Q9NVV9 213 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 TNRC6CQ9HCJ0 1690 aaKnown RBP13.13□□□□□ -0.31
VPS52-218ENST00000482399 OGTO15294 1046 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 LSM8O95777 96 aaKnown RBP13.13□□□□□ -0.31
VPS52-218ENST00000482399 EIF4BP23588 611 aaKnown RBP13.13□□□□□ -0.31
VPS52-218ENST00000482399 PMLP29590 882 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 NUMBP49757 651 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 PRAMEP78395 509 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 FOXB2Q5VYV0 432 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 EEF1DP3Q658K8 133 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 MTHFD1LQ6UB35 978 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 PID1Q7Z2X4 250 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 ACOT1Q86TX2 421 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 ZBTB46Q86UZ6 589 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 TRIML2Q8N7C3 387 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 NTPCRQ9BSD7 190 aaKnown RBP13.13□□□□□ -0.31
VPS52-218ENST00000482399 UBE2OQ9C0C9 1292 aaKnown RBP13.13□□□□□ -0.31
VPS52-218ENST00000482399 WDR55Q9H6Y2 383 aaPredicted RBP13.13□□□□□ -0.31
VPS52-218ENST00000482399 COPS7BQ9H9Q2 264 aaPredicted RBP13.13□□□□□ -0.31
VPS52-218ENST00000482399 BTBD7Q9P203 1132 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 CYTH4Q9UIA0 394 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 SNX9Q9Y5X1 595 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 RPS6KL1Q9Y6S9 549 aa13.13□□□□□ -0.31
VPS52-218ENST00000482399 KCNK1O00180 336 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 TBC1D12O60347 775 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 TRUB2O95900 331 aaKnown RBP13.12□□□□□ -0.31
VPS52-218ENST00000482399 MGAT1P26572 445 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 ACTR3P61158 418 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 FSTL1Q12841 308 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 PDK3Q15120 406 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 NRF1Q16656 503 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 SH2D4BQ5SQS7 431 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 FAM131BQ86XD5 332 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 BRSK2Q8IWQ3 736 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 PPP1R13LQ8WUF5 828 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 FERMT1Q9BQL6 677 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 PORCNQ9H237 461 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 NHSL1Q5SYE7 1610 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 PMM2O15305 246 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 CLPTM1O96005 669 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 EDN1P05305 212 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 BPGMP07738 259 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 NFICP08651 508 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 RALBP11234 206 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 FGFR3P22607 806 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 AVPR1AP37288 418 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 FLOT2Q14254 428 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 KRT72Q14CN4 511 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 PDCD2Q16342 344 aaPredicted RBP13.12□□□□□ -0.31
VPS52-218ENST00000482399 CA9Q16790 459 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 ATF7IP2Q5U623 682 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 DRICH1Q6PGQ1 229 aaPredicted RBP13.12□□□□□ -0.31
VPS52-218ENST00000482399 KCNT2Q6UVM3 1135 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 NIPA1Q7RTP0 329 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 KRT27Q7Z3Y8 459 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 RNF135Q8IUD6 432 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 ARFGAP1Q8N6T3 406 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 GPRASP2Q96D09 838 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 CYLDQ9NQC7 956 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 UBP1Q9NZI7 540 aa13.12□□□□□ -0.31
VPS52-218ENST00000482399 COL14A1Q05707 1796 aaKnown RBP13.12□□□□□ -0.31
VPS52-218ENST00000482399 WNT10BO00744 389 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 SEC24DO94855 1032 aaPredicted RBP13.11□□□□□ -0.31
VPS52-218ENST00000482399 VCLP18206 1134 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 TCF7P36402 384 aaPredicted RBP13.11□□□□□ -0.31
VPS52-218ENST00000482399 NME3Q13232 169 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 OLIG2Q13516 323 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 GEN1Q17RS7 908 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 GLRA4Q5JXX5 417 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 ARHGAP18Q8N392 663 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 FAM156AQ8NDB6 213 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 LPAR1Q92633 364 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 AZIN2Q96A70 460 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 CMTM5Q96DZ9 223 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 CPB2Q96IY4 423 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 TRAPPC9Q96Q05 1148 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 LGMNQ99538 433 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 SEMA6AQ9H2E6 1030 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 S100A14Q9HCY8 104 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 KLHL8Q9P2G9 620 aaPredicted RBP13.11□□□□□ -0.31
VPS52-218ENST00000482399 FAF1Q9UNN5 650 aaPredicted RBP13.11□□□□□ -0.31
VPS52-218ENST00000482399 SIN3BO75182 1162 aa13.11□□□□□ -0.31
VPS52-218ENST00000482399 KLHL2O95198 593 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms