RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 SLC2A7Q6PXP3 512 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 MEX3BQ6ZN04 569 aaKnown RBP4.44□□□□□ -1.7
VPS41-212ENST00000482217 DBX2Q6ZNG2 339 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 DOK3Q7L591 496 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 MAEAQ7L5Y9 396 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 SLFN11Q7Z7L1 901 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 C2CD5Q86YS7 1000 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 SPATA2LQ8IUW3 424 aaPredicted RBP4.44□□□□□ -1.7
VPS41-212ENST00000482217 UNC45BQ8IWX7 931 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 ZGPATQ8N5A5 531 aaKnown RBP4.44□□□□□ -1.7
VPS41-212ENST00000482217 LINS1Q8NG48 757 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 OR52K2Q8NGK3 314 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 RNF139Q8WU17 664 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 STYXQ8WUJ0 223 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 C17orf50Q8WW18 174 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 EXOC4Q96A65 974 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 PTPN18Q99952 460 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 CRACR2AQ9BSW2 395 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 ITPAQ9BY32 194 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 STK33Q9BYT3 514 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 BTBD1Q9H0C5 482 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 PRDM13Q9H4Q3 707 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 LDAHQ9H6V9 325 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 RXFP3Q9NSD7 469 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 TBCCD1Q9NVR7 557 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 ZNHIT6Q9NWK9 470 aaKnown RBP4.44□□□□□ -1.7
VPS41-212ENST00000482217 AKAP7Q9P0M2 348 aaPredicted RBP4.44□□□□□ -1.7
VPS41-212ENST00000482217 PPP4R1LQ9P1A2 415 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 CHORDC1Q9UHD1 332 aaPredicted RBP4.44□□□□□ -1.7
VPS41-212ENST00000482217 MOSPD1Q9UJG1 213 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 JRKLQ9Y4A0 524 aa4.44□□□□□ -1.7
VPS41-212ENST00000482217 ZMYM3Q14202 1370 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 GOLGA6L3A6NEY3 463 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 DDX39AO00148 427 aaKnown RBP4.43□□□□□ -1.7
VPS41-212ENST00000482217 AP3D1O14617 1153 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 MCF2LO15068 1137 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 NEMFO60524 1076 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 KINO60870 393 aaKnown RBP4.43□□□□□ -1.7
VPS41-212ENST00000482217 SLU7O95391 586 aaKnown RBP4.43□□□□□ -1.7
VPS41-212ENST00000482217 LARGE1O95461 756 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 TPM3P06753 285 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 PDHA1P08559 390 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 HNRNPA1P09651 372 aaKnown RBP eCLIP4.43□□□□□ -1.7
VPS41-212ENST00000482217 TSPY4P0CV99 314 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 TSPY10P0CW01 314 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 NR2F1P10589 423 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 PDHBP11177 359 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 IFNAR1P17181 557 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 MALP21145 153 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 EEF1GP26641 437 aaKnown RBP4.43□□□□□ -1.7
VPS41-212ENST00000482217 PCSK1P29120 753 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 CIITAP33076 1130 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 CENPAP49450 140 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 SULT1E1P49888 294 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 CPT1AP50416 773 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 GPC3P51654 580 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 RNASE9P60153 205 aaKnown RBP4.43□□□□□ -1.7
VPS41-212ENST00000482217 BFSP1Q12934 665 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 SNAPC2Q13487 334 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 EFR3AQ14156 821 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 RABEP1Q15276 862 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 KBTBD12Q3ZCT8 623 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 CCDC157Q569K6 752 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 MFSD14BQ5SR56 506 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 NAA16Q6N069 864 aaPredicted RBP4.43□□□□□ -1.7
VPS41-212ENST00000482217 GLB1LQ6UWU2 654 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 SYNE3Q6ZMZ3 975 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 SEM1Q6ZVN7 128 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 PLEKHM3Q6ZWE6 761 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 RUFY3Q7L099 469 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 SZRD1Q7Z422 152 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 TMEM110Q86TL2 294 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 FAM83AQ86UY5 434 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 CIR1Q86X95 450 aaPredicted RBP4.43□□□□□ -1.7
VPS41-212ENST00000482217 PLXDC1Q8IUK5 500 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 ZBTB8BQ8NAP8 495 aaPredicted RBP4.43□□□□□ -1.7
VPS41-212ENST00000482217 CEP76Q8TAP6 659 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 KLHDC4Q8TBB5 520 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 OTUD7AQ8TE49 926 aaPredicted RBP4.43□□□□□ -1.7
VPS41-212ENST00000482217 ZFAND2BQ8WV99 257 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 MUL1Q969V5 352 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 MTFMTQ96DP5 389 aaKnown RBP4.43□□□□□ -1.7
VPS41-212ENST00000482217 BICD1Q96G01 975 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 CCDC114Q96M63 670 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 AK8Q96MA6 479 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 ZNF512Q96ME7 567 aaPredicted RBP4.43□□□□□ -1.7
VPS41-212ENST00000482217 HEPHQ9BQS7 1158 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 HGH1Q9BTY7 390 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 ANKRD2Q9GZV1 360 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 KCNH6Q9H252 994 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 EPC1Q9H2F5 836 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 TNMDQ9H2S6 317 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 NDST4Q9H3R1 872 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 WDCPQ9H6R7 721 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 EPS8L2Q9H6S3 715 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 MLXIPQ9HAP2 919 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 PLA2G3Q9NZ20 509 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 FAM30AQ9NZY2 134 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 DNAJB9Q9UBS3 223 aa4.43□□□□□ -1.7
VPS41-212ENST00000482217 CLIP2Q9UDT6 1046 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms