RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 RWDD3Q9Y3V2 267 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 KNSTRNQ9Y448 316 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 WDR33Q9C0J8 1336 aaKnown RBP3.59□□□□□ -1.83
SMC6-208ENST00000481708 HNRNPDLO14979 420 aaKnown RBP3.59□□□□□ -1.83
SMC6-208ENST00000481708 APBB3O95704 486 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 GUCA1CO95843 209 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 F13BP05160 661 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 CNPP09543 421 aaKnown RBP3.59□□□□□ -1.83
SMC6-208ENST00000481708 PEPDP12955 493 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 CHMP24386 653 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 ACTR2P61160 394 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 ACTN3Q08043 901 aaPredicted RBP3.59□□□□□ -1.83
SMC6-208ENST00000481708 NFIXQ14938 502 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 SF3B3Q15393 1217 aaKnown RBP3.59□□□□□ -1.83
SMC6-208ENST00000481708 MUM1L1Q5H9M0 696 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 ZNF484Q5JVG2 852 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 CAVIN1Q6NZI2 390 aaKnown RBP3.59□□□□□ -1.83
SMC6-208ENST00000481708 CNSTQ6PJW8 725 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 BTNL9Q6UXG8 535 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 SYT13Q7L8C5 426 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 SDCCAG8Q86SQ7 713 aaPredicted RBP3.59□□□□□ -1.83
SMC6-208ENST00000481708 RHOT2Q8IXI1 618 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 MFSD4AQ8N468 514 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 METTL6Q8TCB7 284 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 FNIP1Q8TF40 1166 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 HAPLN2Q9GZV7 340 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 LDAHQ9H6V9 325 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 SIT1Q9Y3P8 196 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 DTNAQ9Y4J8 743 aa3.59□□□□□ -1.83
SMC6-208ENST00000481708 UBN2Q6ZU65 1347 aa3.59□□□□□ -1.84
SMC6-208ENST00000481708 A0A1W2PQF6 199 aa3.59□□□□□ -1.84
SMC6-208ENST00000481708 CHGBP05060 677 aa3.59□□□□□ -1.84
SMC6-208ENST00000481708 FUT4P22083 530 aa3.59□□□□□ -1.84
SMC6-208ENST00000481708 CYP7A1P22680 504 aa3.59□□□□□ -1.84
SMC6-208ENST00000481708 ATP5F1P24539 256 aaPredicted RBP3.59□□□□□ -1.84
SMC6-208ENST00000481708 RPS12P25398 132 aaKnown RBP3.59□□□□□ -1.84
SMC6-208ENST00000481708 KIR3DL1P43629 444 aa3.59□□□□□ -1.84
SMC6-208ENST00000481708 HARS2P49590 506 aaKnown RBP3.59□□□□□ -1.84
SMC6-208ENST00000481708 SLC12A3P55017 1021 aa3.59□□□□□ -1.84
SMC6-208ENST00000481708 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.59□□□□□ -1.84
SMC6-208ENST00000481708 SCAPQ12770 1279 aa3.59□□□□□ -1.84
SMC6-208ENST00000481708 PRAMEF14Q5SWL7 426 aa3.59□□□□□ -1.84
SMC6-208ENST00000481708 EMC10Q5UCC4 262 aa3.59□□□□□ -1.84
SMC6-208ENST00000481708 RAB12Q6IQ22 244 aa3.59□□□□□ -1.84
SMC6-208ENST00000481708 TOM1L2Q6ZVM7 507 aa3.59□□□□□ -1.84
SMC6-208ENST00000481708 RNF44Q7L0R7 432 aa3.59□□□□□ -1.84
SMC6-208ENST00000481708 ZER1Q7Z7L7 766 aa3.59□□□□□ -1.84
SMC6-208ENST00000481708 ERC1Q8IUD2 1116 aa3.59□□□□□ -1.84
SMC6-208ENST00000481708 KBTBD7Q8WVZ9 684 aa3.59□□□□□ -1.84
SMC6-208ENST00000481708 KTI12Q96EK9 354 aaPredicted RBP3.59□□□□□ -1.84
SMC6-208ENST00000481708 MECRQ9BV79 373 aa3.59□□□□□ -1.84
SMC6-208ENST00000481708 MUC13Q9H3R2 512 aa3.59□□□□□ -1.84
SMC6-208ENST00000481708 MAGEL2Q9UJ55 1249 aa3.59□□□□□ -1.84
SMC6-208ENST00000481708 CORO1CQ9ULV4 474 aaPredicted RBP3.59□□□□□ -1.84
SMC6-208ENST00000481708 EPN1Q9Y6I3 576 aaPredicted RBP3.59□□□□□ -1.84
SMC6-208ENST00000481708 H7BY64 318 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 KRT38O76015 456 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 SNRNP70P08621 437 aaKnown RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 MSL3P1P0C860 447 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 BCAT1P54687 386 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 OXCT1P55809 520 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 ARF3P61204 181 aaPredicted RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 ARF1P84077 181 aaKnown RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 HFEQ30201 348 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 MAJINQ3KP22 176 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 TRIM60Q495X7 471 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 ZNF805Q5CZA5 627 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 CWF19L1Q69YN2 538 aaKnown RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 ZNF574Q6ZN55 896 aaPredicted RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 IKBIPQ70UQ0 350 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 SPACA3Q8IXA5 215 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 LRRC71Q8N4P6 559 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 ZNF655Q8N720 491 aaPredicted RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 CCHCR1Q8TD31 782 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 ABHD8Q96I13 439 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 WDFY2Q96P53 400 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 EYA3Q99504 573 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 ACAT2Q9BWD1 397 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 TEX13AQ9BXU3 409 aaPredicted RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 GPR62Q9BZJ7 368 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 PADI1Q9ULC6 663 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 ANK1P16157 1881 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 A8MXE2 369 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 IGF2BP3O00425 579 aaKnown RBP eCLIP3.58□□□□□ -1.84
SMC6-208ENST00000481708 KINO60870 393 aaKnown RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 PSMD10O75832 226 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 SCGB1D1O95968 90 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 RARGP13631 454 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 BTF3P20290 206 aaKnown RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 IL4RP24394 825 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 CPT1AP50416 773 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 RPS3AP61247 264 aaKnown RBP3.58□□□□□ -1.84
SMC6-208ENST00000481708 RBP5P82980 135 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 CD69Q07108 199 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 SGCGQ13326 291 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 BAK1Q16611 211 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 ISLR2Q6UXK2 745 aa3.58□□□□□ -1.84
SMC6-208ENST00000481708 PRR23CQ6ZRP0 262 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms