RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 CPSF3Q9UKF6 684 aaKnown RBP10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 PCDHA3Q9Y5H8 950 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 NRKQ7Z2Y5 1582 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 ECM29Q5VYK3 1845 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 CLDN25C9JDP6 229 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 PI4K2BG5E9Z4 385 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 TRDMT1O14717 391 aaKnown RBP10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 CLPXO76031 633 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 RAG1P15918 1043 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 PSMC3P17980 439 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 ALAS2P22557 587 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 PTGIRP43119 386 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 ZAP70P43403 619 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 RPL21P46778 160 aaKnown RBP10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 NPEPPSP55786 919 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 BNIP3Q12983 259 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 AP3B2Q13367 1082 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 INAVAQ3KP66 663 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 RRAGAQ7L523 313 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 ANKLE2Q86XL3 938 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 PQLC1Q8N2U9 271 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 SLC26A7Q8TE54 656 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 SLC44A1Q8WWI5 657 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 CSRNP1Q96S65 589 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 MKNK1Q9BUB5 465 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 BTBD2Q9BX70 525 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 HEMGNQ9BXL5 484 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 PITHD1Q9GZP4 211 aaPredicted RBP10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 CDC42EP4Q9H3Q1 356 aaKnown RBP10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 HMG20AQ9NP66 347 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 PSMD13Q9UNM6 376 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 SLIT3O75094 1523 aa10.69□□□□□ -0.7
PRPF4B-206ENST00000481109 A0A087WXM4 84 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 GTPBP10A4D1E9 387 aaKnown RBP10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 C16orf96A6NNT2 1141 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 GIPC1O14908 333 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 MAN1A2O60476 641 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 ZNF3P17036 446 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 PSMA4P25789 261 aaKnown RBP10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 CHRNA3P32297 505 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 NDST2P52849 883 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 GRSF1Q12849 480 aaKnown RBP eCLIP10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 TAF5Q15542 800 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 DLG2Q15700 870 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 Q3ZCU0 254 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 ALFQ53S48 1182 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 DALRD3Q5D0E6 543 aaKnown RBP10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 ZBTB41Q5SVQ8 909 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 CYP20A1Q6UW02 462 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 KBTBD6Q86V97 674 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 GATAD2AQ86YP4 633 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 DEPDC4Q8N2C3 294 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 IL17REQ8NFR9 667 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 RSAD2Q8WXG1 361 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 ACDQ96AP0 544 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 FAM89AQ96GI7 184 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 TMEM80Q96HE8 168 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 ZNF496Q96IT1 587 aaPredicted RBP10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 CNOT6LQ96LI5 555 aaKnown RBP10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 GCOM2Q9BZD3 368 aaPredicted RBP10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 BOLA2Q9H3K6 86 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 PNPLA3Q9NST1 481 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 PPP1R14DQ9NXH3 145 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 IL37Q9NZH6 218 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 KCND2Q9NZV8 630 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 GNEQ9Y223 722 aaKnown RBP10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 VWA7Q9Y334 891 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 RIPK3Q9Y572 518 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 STON1Q9Y6Q2 735 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 C1orf167Q5SNV9 1468 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 A0A0A6YYK5 440 aaPredicted RBP10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 A0A1W2PPW3 197 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 TRIM49BA6NDI0 452 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 H0Y858 1186 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 FCHO1O14526 889 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 TTC4O95801 387 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 SERPINB1P30740 379 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 SHMT1P34896 483 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 ADCY7P51828 1080 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 HK2P52789 917 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 ADGRE1Q14246 886 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 MAPRE1Q15691 268 aaKnown RBP10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 TAF12Q16514 161 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 WDR44Q5JSH3 913 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 PDXDC2PQ6P474 469 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 PGM2L1Q6PCE3 622 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 RANBP10Q6VN20 620 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 SPATA2LQ8IUW3 424 aaPredicted RBP10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 PM20D2Q8IYS1 436 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 GSTCDQ8NEC7 633 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 EAF2Q96CJ1 260 aaPredicted RBP10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 OXNAD1Q96HP4 312 aaPredicted RBP10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 MCMBPQ9BTE3 642 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 OR51B5Q9H339 312 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 PLEKHA5Q9HAU0 1116 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 SSU72Q9NP77 194 aaKnown RBP10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 CHST12Q9NRB3 414 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 PARVAQ9NVD7 372 aa10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 DIMT1Q9UNQ2 313 aaKnown RBP10.68□□□□□ -0.7
PRPF4B-206ENST00000481109 NAALADL1Q9UQQ1 740 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms