RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 RNASE9P60153 205 aaKnown RBP12.79□□□□□ -0.36
TRA2B-212ENST00000480461 SLC7A9P82251 487 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 EIF4EBP2Q13542 120 aaPredicted RBP12.79□□□□□ -0.36
TRA2B-212ENST00000480461 RAB6CQ53S08 254 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 EFHC1Q5JVL4 640 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 C10orf120Q5SQS8 335 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 PPP1R15BQ5SWA1 713 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 CCDC122Q5T0U0 273 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 BTBD8Q5XKL5 378 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 ALKBH5Q6P6C2 394 aaKnown RBP12.79□□□□□ -0.36
TRA2B-212ENST00000480461 SLC26A9Q7LBE3 791 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 DEFB106AQ8N104 65 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 SLC44A3Q8N4M1 653 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 JOSD2Q8TAC2 188 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 SLC2A13Q96QE2 648 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 GCNAQ96QF7 691 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 KXD1Q9BQD3 176 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 PACSIN1Q9BY11 444 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 RAB6CQ9H0N0 254 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 SLITRK6Q9H5Y7 841 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 SYNCQ9H7C4 482 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 KCNK12Q9HB15 430 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 ABCC13Q9NSE7 274 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 TDP1Q9NUW8 608 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 ZNHIT6Q9NWK9 470 aaKnown RBP12.79□□□□□ -0.36
TRA2B-212ENST00000480461 SMPD4Q9NXE4 827 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 SFMBT1Q9UHJ3 866 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 ZFP37Q9Y6Q3 630 aaPredicted RBP12.79□□□□□ -0.36
TRA2B-212ENST00000480461 NUMBLQ9Y6R0 609 aa12.79□□□□□ -0.36
TRA2B-212ENST00000480461 ANAPC1Q9H1A4 1944 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 FANCMQ8IYD8 2048 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 KRBA1A5PL33 1030 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 SOWAHDA6NJG2 315 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 ATMINO43313 823 aaPredicted RBP12.78□□□□□ -0.36
TRA2B-212ENST00000480461 KLKB1P03952 638 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 RFC1P35251 1148 aaPredicted RBP12.78□□□□□ -0.36
TRA2B-212ENST00000480461 ATP5C1P36542 298 aaKnown RBP12.78□□□□□ -0.36
TRA2B-212ENST00000480461 FLT3P36888 993 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 EFEMP1Q12805 493 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 MAMLD1Q13495 774 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 SLC18A3Q16572 532 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 TSR1Q2NL82 804 aaKnown RBP12.78□□□□□ -0.36
TRA2B-212ENST00000480461 OTUD1Q5VV17 481 aaPredicted RBP12.78□□□□□ -0.36
TRA2B-212ENST00000480461 KLHDC10Q6PID8 442 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 ZC3H14Q6PJT7 736 aaKnown RBP12.78□□□□□ -0.36
TRA2B-212ENST00000480461 VITQ6UXI7 678 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 RAD9BQ6WBX8 426 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 BEND5Q7L4P6 421 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 ARHGAP18Q8N392 663 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 DCLK2Q8N568 766 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 EMC1Q8N766 993 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 ADAM32Q8TC27 787 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 IPO4Q8TEX9 1081 aaKnown RBP12.78□□□□□ -0.36
TRA2B-212ENST00000480461 RUBCNQ92622 972 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 NT5C3BQ969T7 300 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 FAM149B1Q96BN6 582 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 VCPIP1Q96JH7 1222 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 LINC00597Q9H2U6 94 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 ASNSD1Q9NWL6 643 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 DNMT3LQ9UJW3 386 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 ARHGAP26Q9UNA1 814 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 CPQQ9Y646 472 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 GPR179Q6PRD1 2367 aa12.78□□□□□ -0.36
TRA2B-212ENST00000480461 OBSL1O75147 1896 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 SIGLEC16A6NMB1 481 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 HEPACAM2A8MVW5 462 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 LEFTY2O00292 366 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 SCAMP3O14828 347 aaKnown RBP12.77□□□□□ -0.37
TRA2B-212ENST00000480461 IGLV3-25P01717 112 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 CKMP06732 381 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 GLI1P08151 1106 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 MBL2P11226 248 aaPredicted RBP12.77□□□□□ -0.37
TRA2B-212ENST00000480461 RALAP11233 206 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 NCAM1P13591 858 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 PFKLP17858 780 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 SCNN1AP37088 669 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 AVPR1AP37288 418 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 GALCP54803 685 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 GSCP56915 257 aaPredicted RBP12.77□□□□□ -0.37
TRA2B-212ENST00000480461 RPL7AP62424 266 aaKnown RBP12.77□□□□□ -0.37
TRA2B-212ENST00000480461 OGDHQ02218 1023 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 RSPO4Q2I0M5 234 aaPredicted RBP12.77□□□□□ -0.37
TRA2B-212ENST00000480461 DCAF6Q58WW2 860 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 FAM102AQ5T9C2 384 aaPredicted RBP12.77□□□□□ -0.37
TRA2B-212ENST00000480461 SH3PXD2AQ5TCZ1 1133 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 PLEKHA7Q6IQ23 1121 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 MSANTD2Q6P1R3 559 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 MIB1Q86YT6 1006 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 ZDHHC17Q8IUH5 632 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 DQX1Q8TE96 717 aaKnown RBP12.77□□□□□ -0.37
TRA2B-212ENST00000480461 SH3RF2Q8TEC5 729 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 ELSPBP1Q96BH3 223 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 ARHGEF26Q96DR7 871 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 CCDC42Q96M95 316 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 DDX23Q9BUQ8 820 aaKnown RBP12.77□□□□□ -0.37
TRA2B-212ENST00000480461 TRIM7Q9C029 511 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 THAP2Q9H0W7 228 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 POPDC2Q9HBU9 364 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 ZFP14Q9HCL3 533 aa12.77□□□□□ -0.37
TRA2B-212ENST00000480461 METTL5Q9NRN9 209 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms