RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 ACADMP11310 421 aa18.29■□□□□ 0.52
HMGN1-212ENST00000479586 ACO1P21399 889 aaKnown RBP18.29■□□□□ 0.52
HMGN1-212ENST00000479586 PRKCHP24723 683 aa18.29■□□□□ 0.52
HMGN1-212ENST00000479586 ZNF132P52740 706 aa18.29■□□□□ 0.52
HMGN1-212ENST00000479586 MFAP3P55082 362 aa18.29■□□□□ 0.52
HMGN1-212ENST00000479586 ALCAMQ13740 583 aa18.29■□□□□ 0.52
HMGN1-212ENST00000479586 PCSK4Q6UW60 755 aa18.29■□□□□ 0.52
HMGN1-212ENST00000479586 ZMIZ2Q8NF64 920 aa18.29■□□□□ 0.52
HMGN1-212ENST00000479586 IGSF8Q969P0 613 aa18.29■□□□□ 0.52
HMGN1-212ENST00000479586 SMARCD1Q96GM5 515 aa18.29■□□□□ 0.52
HMGN1-212ENST00000479586 SMYD3Q9H7B4 428 aa18.29■□□□□ 0.52
HMGN1-212ENST00000479586 TM9SF3Q9HD45 589 aa18.29■□□□□ 0.52
HMGN1-212ENST00000479586 KRT82Q9NSB4 513 aa18.29■□□□□ 0.52
HMGN1-212ENST00000479586 COMMD8Q9NX08 183 aa18.29■□□□□ 0.52
HMGN1-212ENST00000479586 OSER1Q9NX31 292 aa18.29■□□□□ 0.52
HMGN1-212ENST00000479586 SLC27A6Q9Y2P4 619 aa18.29■□□□□ 0.52
HMGN1-212ENST00000479586 KIF3AQ9Y496 699 aa18.29■□□□□ 0.52
HMGN1-212ENST00000479586 H3BQV1 296 aa18.28■□□□□ 0.52
HMGN1-212ENST00000479586 KIAA0391O15091 583 aaKnown RBP18.28■□□□□ 0.52
HMGN1-212ENST00000479586 BEST1O76090 585 aa18.28■□□□□ 0.52
HMGN1-212ENST00000479586 CDH8P55286 799 aa18.28■□□□□ 0.52
HMGN1-212ENST00000479586 MYL6P60660 151 aa18.28■□□□□ 0.52
HMGN1-212ENST00000479586 GOLGA8FQ08AF8 430 aa18.28■□□□□ 0.52
HMGN1-212ENST00000479586 GOLGA8DPQ0D2H9 430 aa18.28■□□□□ 0.52
HMGN1-212ENST00000479586 ZNF234Q14588 700 aa18.28■□□□□ 0.52
HMGN1-212ENST00000479586 TEAD4Q15561 434 aa18.28■□□□□ 0.52
HMGN1-212ENST00000479586 C6orf118Q5T5N4 469 aa18.28■□□□□ 0.52
HMGN1-212ENST00000479586 Q6ZNB5 142 aa18.28■□□□□ 0.52
HMGN1-212ENST00000479586 ENGASEQ8NFI3 743 aa18.28■□□□□ 0.52
HMGN1-212ENST00000479586 SMOQ99835 787 aa18.28■□□□□ 0.52
HMGN1-212ENST00000479586 PCED1AQ9H1Q7 454 aa18.28■□□□□ 0.52
HMGN1-212ENST00000479586 CYLDQ9NQC7 956 aa18.28■□□□□ 0.52
HMGN1-212ENST00000479586 TLR8Q9NR97 1041 aaKnown RBP18.28■□□□□ 0.52
HMGN1-212ENST00000479586 HSPBP1Q9NZL4 362 aa18.28■□□□□ 0.52
HMGN1-212ENST00000479586 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.28■□□□□ 0.52
HMGN1-212ENST00000479586 FRMD3A2A2Y4 597 aa18.27■□□□□ 0.52
HMGN1-212ENST00000479586 CBX4O00257 560 aa18.27■□□□□ 0.52
HMGN1-212ENST00000479586 CAPN9O14815 690 aa18.27■□□□□ 0.52
HMGN1-212ENST00000479586 NPC1O15118 1278 aa18.27■□□□□ 0.52
HMGN1-212ENST00000479586 RRP8O43159 456 aaKnown RBP18.27■□□□□ 0.52
HMGN1-212ENST00000479586 JUPP14923 745 aa18.27■□□□□ 0.52
HMGN1-212ENST00000479586 TNNI1P19237 187 aa18.27■□□□□ 0.52
HMGN1-212ENST00000479586 ACSL1P33121 698 aa18.27■□□□□ 0.52
HMGN1-212ENST00000479586 ATP5C1P36542 298 aaKnown RBP18.27■□□□□ 0.52
HMGN1-212ENST00000479586 GRIA4P48058 902 aa18.27■□□□□ 0.52
HMGN1-212ENST00000479586 SV2BQ7L1I2 683 aa18.27■□□□□ 0.52
HMGN1-212ENST00000479586 FUKQ8N0W3 1084 aa18.27■□□□□ 0.52
HMGN1-212ENST00000479586 RDH13Q8NBN7 331 aa18.27■□□□□ 0.52
HMGN1-212ENST00000479586 SORCS1Q8WY21 1168 aa18.27■□□□□ 0.52
HMGN1-212ENST00000479586 CGRRF1Q99675 332 aa18.27■□□□□ 0.52
HMGN1-212ENST00000479586 XYLT2Q9H1B5 865 aa18.27■□□□□ 0.52
HMGN1-212ENST00000479586 NUDT5Q9UKK9 219 aa18.27■□□□□ 0.52
HMGN1-212ENST00000479586 AK5Q9Y6K8 562 aa18.27■□□□□ 0.52
HMGN1-212ENST00000479586 BMP15O95972 392 aa18.26■□□□□ 0.51
HMGN1-212ENST00000479586 PENKP01210 267 aaPredicted RBP18.26■□□□□ 0.51
HMGN1-212ENST00000479586 EPHX1P07099 455 aa18.26■□□□□ 0.51
HMGN1-212ENST00000479586 HNF1BP35680 557 aa18.26■□□□□ 0.51
HMGN1-212ENST00000479586 CFHR1Q03591 330 aa18.26■□□□□ 0.51
HMGN1-212ENST00000479586 ORC1Q13415 861 aa18.26■□□□□ 0.51
HMGN1-212ENST00000479586 FYB2Q5VWT5 728 aa18.26■□□□□ 0.51
HMGN1-212ENST00000479586 GPR155Q7Z3F1 870 aa18.26■□□□□ 0.51
HMGN1-212ENST00000479586 UCMAQ8WVF2 138 aa18.26■□□□□ 0.51
HMGN1-212ENST00000479586 CCDC127Q96BQ5 260 aa18.26■□□□□ 0.51
HMGN1-212ENST00000479586 FBXO44Q9H4M3 255 aa18.26■□□□□ 0.51
HMGN1-212ENST00000479586 OSGEPQ9NPF4 335 aa18.26■□□□□ 0.51
HMGN1-212ENST00000479586 PANK4Q9NVE7 773 aa18.26■□□□□ 0.51
HMGN1-212ENST00000479586 TP53BP1Q12888 1972 aaPredicted RBP18.26■□□□□ 0.51
HMGN1-212ENST00000479586 TEX51A0A1B0GUA7 166 aa18.25■□□□□ 0.51
HMGN1-212ENST00000479586 CYP26A1O43174 497 aa18.25■□□□□ 0.51
HMGN1-212ENST00000479586 CCDC130P13994 396 aa18.25■□□□□ 0.51
HMGN1-212ENST00000479586 CTSKP43235 329 aa18.25■□□□□ 0.51
HMGN1-212ENST00000479586 MAP3K7CLP57077 242 aa18.25■□□□□ 0.51
HMGN1-212ENST00000479586 TARDBPQ13148 414 aaKnown RBP eCLIP18.25■□□□□ 0.516e-12■□□□□ 10.5
HMGN1-212ENST00000479586 DNAJC3Q13217 504 aa18.25■□□□□ 0.51
HMGN1-212ENST00000479586 SNRNP35Q16560 246 aaKnown RBP18.25■□□□□ 0.51
HMGN1-212ENST00000479586 INAVAQ3KP66 663 aa18.25■□□□□ 0.51
HMGN1-212ENST00000479586 RRAGBQ5VZM2 374 aa18.25■□□□□ 0.51
HMGN1-212ENST00000479586 GPRIN1Q7Z2K8 1008 aa18.25■□□□□ 0.51
HMGN1-212ENST00000479586 GATAD2AQ86YP4 633 aa18.25■□□□□ 0.51
HMGN1-212ENST00000479586 RBBP8NLQ8NC74 664 aaPredicted RBP18.25■□□□□ 0.51
HMGN1-212ENST00000479586 SNIP1Q8TAD8 396 aaKnown RBP18.25■□□□□ 0.51
HMGN1-212ENST00000479586 ZNF516Q92618 1163 aa18.25■□□□□ 0.51
HMGN1-212ENST00000479586 HPS3Q969F9 1004 aa18.25■□□□□ 0.51
HMGN1-212ENST00000479586 ELMO3Q96BJ8 720 aa18.25■□□□□ 0.51
HMGN1-212ENST00000479586 BIRC7Q96CA5 298 aa18.25■□□□□ 0.51
HMGN1-212ENST00000479586 NMUR1Q9HB89 426 aa18.25■□□□□ 0.51
HMGN1-212ENST00000479586 ELOVL2Q9NXB9 296 aa18.25■□□□□ 0.51
HMGN1-212ENST00000479586 CCDC39Q9UFE4 941 aa18.25■□□□□ 0.51
HMGN1-212ENST00000479586 PCDHGA1Q9Y5H4 931 aa18.25■□□□□ 0.51
HMGN1-212ENST00000479586 SPTA1P02549 2419 aa18.25■□□□□ 0.51
HMGN1-212ENST00000479586 COL5A1P20908 1838 aaPredicted RBP18.25■□□□□ 0.51
HMGN1-212ENST00000479586 COL6A6A6NMZ7 2263 aa18.25■□□□□ 0.51
HMGN1-212ENST00000479586 MYLKQ15746 1914 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 ENC1O14682 589 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 PAPSS1O43252 624 aaPredicted RBP18.24■□□□□ 0.51
HMGN1-212ENST00000479586 STC2O76061 302 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 STAU1O95793 577 aaKnown RBP18.24■□□□□ 0.51
HMGN1-212ENST00000479586 KLKB1P03952 638 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 GJB2P29033 226 aa18.24■□□□□ 0.51
HMGN1-212ENST00000479586 HOXD13P35453 343 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms