RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 ETF1P62495 437 aaKnown RBP13.66□□□□□ -0.22
CHD3-210ENST00000479080 EFEMP1Q12805 493 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 PIGHQ14442 188 aaPredicted RBP13.66□□□□□ -0.22
CHD3-210ENST00000479080 TEAD2Q15562 447 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 TAF12Q16514 161 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 CA9Q16790 459 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 ATP13A4Q4VNC1 1196 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 DCAF12L1Q5VU92 463 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 GPR153Q6NV75 609 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 ANKS1BQ7Z6G8 1248 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 MICALL1Q8N3F8 863 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 TRIM58Q8NG06 486 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 ALG3Q92685 438 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 PPP2R3CQ969Q6 453 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 ACSF2Q96CM8 615 aaPredicted RBP13.66□□□□□ -0.22
CHD3-210ENST00000479080 HES6Q96HZ4 224 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 FCRL2Q96LA5 508 aaPredicted RBP13.66□□□□□ -0.22
CHD3-210ENST00000479080 SLC46A2Q9BY10 475 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 GPATCH2LQ9NWQ4 482 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 EHD2Q9NZN4 543 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 XPO7Q9UIA9 1087 aaKnown RBP13.66□□□□□ -0.22
CHD3-210ENST00000479080 RASAL2Q9UJF2 1139 aa13.66□□□□□ -0.22
CHD3-210ENST00000479080 SYNJ2BP-COX16A0A087WUM0 186 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 CAPN9O14815 690 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 KIF5CO60282 957 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 GREM1O60565 184 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 XYLBO75191 536 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 MSNP26038 577 aaKnown RBP13.65□□□□□ -0.22
CHD3-210ENST00000479080 CTNNA2P26232 953 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 CTNNA1P35221 906 aaKnown RBP13.65□□□□□ -0.22
CHD3-210ENST00000479080 RDXP35241 583 aaKnown RBP13.65□□□□□ -0.22
CHD3-210ENST00000479080 PCK1P35558 622 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 CXCR3P49682 368 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 ARSEP51690 589 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 AMPD2Q01433 879 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 IFI16Q16666 785 aaKnown RBP13.65□□□□□ -0.22
CHD3-210ENST00000479080 PABPC1LQ4VXU2 614 aaKnown RBP13.65□□□□□ -0.22
CHD3-210ENST00000479080 C10orf120Q5SQS8 335 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 HECTD3Q5T447 861 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 KLHDC10Q6PID8 442 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 SYT10Q6XYQ8 523 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 FAM131BQ86XD5 332 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 ELMOD1Q8N336 334 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 ARL14EPQ8N8R7 260 aaPredicted RBP13.65□□□□□ -0.22
CHD3-210ENST00000479080 PABPC5Q96DU9 382 aaKnown RBP13.65□□□□□ -0.22
CHD3-210ENST00000479080 CALR3Q96L12 384 aaKnown RBP13.65□□□□□ -0.22
CHD3-210ENST00000479080 ZSWIM3Q96MP5 696 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 CYP2S1Q96SQ9 504 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 SNRNP25Q9BV90 132 aaKnown RBP13.65□□□□□ -0.22
CHD3-210ENST00000479080 KLF16Q9BXK1 252 aaPredicted RBP13.65□□□□□ -0.22
CHD3-210ENST00000479080 ATXN3LQ9H3M9 355 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 FAM204AQ9H8W3 233 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 KLHL11Q9NVR0 708 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 DDIT4Q9NX09 232 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 MTMR10Q9NXD2 777 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 CLDND1Q9NY35 253 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 COX16Q9P0S2 106 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 PCSK1NQ9UHG2 260 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 DPP7Q9UHL4 492 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 STAP1Q9ULZ2 295 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 SNX10Q9Y5X0 201 aa13.65□□□□□ -0.22
CHD3-210ENST00000479080 RALAP11233 206 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 CDC25CP30307 473 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 SLC1A1P43005 524 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 PPP3CCP48454 512 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 DEUP1Q05D60 604 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 NME3Q13232 169 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 ACAP1Q15027 740 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 TRIP4Q15650 581 aaPredicted RBP13.64□□□□□ -0.23
CHD3-210ENST00000479080 SMTNL2Q2TAL5 461 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 ZC3H12AQ5D1E8 599 aaKnown RBP13.64□□□□□ -0.23
CHD3-210ENST00000479080 KCNT1Q5JUK3 1230 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 AADACL2Q6P093 401 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 PDZD4Q76G19 769 aaPredicted RBP13.64□□□□□ -0.23
CHD3-210ENST00000479080 MIB1Q86YT6 1006 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 MAB21L3Q8N8X9 362 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 ING5Q8WYH8 240 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 GOLGA1Q92805 767 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 ALS2CR12Q96Q35 445 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 GAS2L1Q99501 681 aaPredicted RBP13.64□□□□□ -0.23
CHD3-210ENST00000479080 HERPUD2Q9BSE4 406 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 SMG9Q9H0W8 520 aaKnown RBP13.64□□□□□ -0.23
CHD3-210ENST00000479080 TRPC7Q9HCX4 862 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 GKN1Q9NS71 199 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 ARHGEF38Q9NXL2 777 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 RRN3Q9NYV6 651 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 MARCH2Q9P0N8 246 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 DENND4CQ5VZ89 1909 aa13.64□□□□□ -0.23
CHD3-210ENST00000479080 XIRP2A4UGR9 3374 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 DENND4AQ7Z401 1863 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.63□□□□□ -0.23
CHD3-210ENST00000479080 SLC12A8A0AV02 714 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 C3orf70A6NLC5 250 aaPredicted RBP13.63□□□□□ -0.23
CHD3-210ENST00000479080 KCNU1A8MYU2 1149 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 SPOPO43791 374 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 PRAMEF12O95522 483 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 HMBSP08397 361 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 CD48P09326 243 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 RARAP10276 462 aa13.63□□□□□ -0.23
CHD3-210ENST00000479080 GJC1P36383 396 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms