RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 ZNF510Q9Y2H8 683 aa13.93□□□□□ -0.18
VCL-205ENST00000478896 GON4LQ3T8J9 2241 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 SPAARA0A1B0GVQ0 90 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 MEI4A8MW99 385 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 GFRA2O00451 464 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 HYAL3O43820 417 aaPredicted RBP13.92□□□□□ -0.18
VCL-205ENST00000478896 RHOBTB3O94955 611 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 RDXP35241 583 aaKnown RBP13.92□□□□□ -0.18
VCL-205ENST00000478896 CHKAP35790 457 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 PSMC2P35998 433 aaKnown RBP13.92□□□□□ -0.18
VCL-205ENST00000478896 KRT85P78386 507 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 COG7P83436 770 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 PPP3CAQ08209 521 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 EFEMP1Q12805 493 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 SEMA3BQ13214 749 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 PLEKHG6Q3KR16 790 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 SYCP2LQ5T4T6 812 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 Q6ZNB5 142 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 RSRC2Q7L4I2 434 aaKnown RBP13.92□□□□□ -0.18
VCL-205ENST00000478896 SLC41A1Q8IVJ1 513 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 UCMAQ8WVF2 138 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 MRGPRX1Q96LB2 322 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 HEXIM2Q96MH2 286 aaKnown RBP13.92□□□□□ -0.18
VCL-205ENST00000478896 DUSP16Q9BY84 665 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 CAPN10Q9HC96 672 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 TMEM8AQ9HCN3 771 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 SUSD2Q9UGT4 822 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 WASF3Q9UPY6 502 aa13.92□□□□□ -0.18
VCL-205ENST00000478896 A0A1W2PQD8 194 aa13.91□□□□□ -0.18
VCL-205ENST00000478896 TMEM8BA6NDV4 472 aa13.91□□□□□ -0.18
VCL-205ENST00000478896 WASH3PC4AMC7 463 aa13.91□□□□□ -0.18
VCL-205ENST00000478896 ARHGAP33O14559 1287 aa13.91□□□□□ -0.18
VCL-205ENST00000478896 CYBBP04839 570 aa13.91□□□□□ -0.18
VCL-205ENST00000478896 CISD3P0C7P0 127 aa13.91□□□□□ -0.18
VCL-205ENST00000478896 GNSP15586 552 aa13.91□□□□□ -0.18
VCL-205ENST00000478896 CORO1AP31146 461 aaKnown RBP13.91□□□□□ -0.18
VCL-205ENST00000478896 SLC8A3P57103 927 aa13.91□□□□□ -0.18
VCL-205ENST00000478896 ADAM9Q13443 819 aa13.91□□□□□ -0.18
VCL-205ENST00000478896 NFIL3Q16649 462 aa13.91□□□□□ -0.18
VCL-205ENST00000478896 KRT39Q6A163 491 aa13.91□□□□□ -0.18
VCL-205ENST00000478896 SCD5Q86SK9 330 aa13.91□□□□□ -0.18
VCL-205ENST00000478896 OR2I1PQ8NGU4 316 aa13.91□□□□□ -0.18
VCL-205ENST00000478896 FOXJ1Q92949 421 aa13.91□□□□□ -0.18
VCL-205ENST00000478896 DCLK3Q9C098 648 aa13.91□□□□□ -0.18
VCL-205ENST00000478896 FAM124BQ9H5Z6 455 aaPredicted RBP13.91□□□□□ -0.18
VCL-205ENST00000478896 CD248Q9HCU0 757 aa13.91□□□□□ -0.18
VCL-205ENST00000478896 CLIC5Q9NZA1 410 aa13.91□□□□□ -0.18
VCL-205ENST00000478896 STRIP2Q9ULQ0 834 aa13.91□□□□□ -0.18
VCL-205ENST00000478896 HPSEQ9Y251 543 aa13.91□□□□□ -0.18
VCL-205ENST00000478896 STON1Q9Y6Q2 735 aa13.91□□□□□ -0.18
VCL-205ENST00000478896 ZFHX4Q86UP3 3567 aa13.9□□□□□ -0.18
VCL-205ENST00000478896 UPK3BL1B0FP48 263 aa13.9□□□□□ -0.18
VCL-205ENST00000478896 UPK3BL2E5RIL1 263 aa13.9□□□□□ -0.18
VCL-205ENST00000478896 SYNCRIPO60506 623 aaKnown RBP13.9□□□□□ -0.18
VCL-205ENST00000478896 CD6P30203 668 aa13.9□□□□□ -0.18
VCL-205ENST00000478896 MXI1P50539 228 aa13.9□□□□□ -0.18
VCL-205ENST00000478896 NDUFA8P51970 172 aa13.9□□□□□ -0.18
VCL-205ENST00000478896 MFAP3P55082 362 aa13.9□□□□□ -0.18
VCL-205ENST00000478896 ARID5AQ03989 594 aa13.9□□□□□ -0.18
VCL-205ENST00000478896 ENPEPQ07075 957 aa13.9□□□□□ -0.18
VCL-205ENST00000478896 DPYDQ12882 1025 aa13.9□□□□□ -0.18
VCL-205ENST00000478896 FUT11Q495W5 492 aa13.9□□□□□ -0.18
VCL-205ENST00000478896 WDR45BQ5MNZ6 344 aa13.9□□□□□ -0.18
VCL-205ENST00000478896 ANKS1BQ7Z6G8 1248 aa13.9□□□□□ -0.18
VCL-205ENST00000478896 PIP4P1Q86T03 277 aa13.9□□□□□ -0.18
VCL-205ENST00000478896 DENND1CQ8IV53 801 aa13.9□□□□□ -0.18
VCL-205ENST00000478896 ARHGAP18Q8N392 663 aa13.9□□□□□ -0.18
VCL-205ENST00000478896 ZCCHC14Q8WYQ9 949 aaKnown RBP13.9□□□□□ -0.18
VCL-205ENST00000478896 TMEM121BQ9BXQ6 578 aaPredicted RBP13.9□□□□□ -0.18
VCL-205ENST00000478896 PRDM16Q9HAZ2 1276 aa13.9□□□□□ -0.18
VCL-205ENST00000478896 RALYQ9UKM9 306 aaKnown RBP13.9□□□□□ -0.18
VCL-205ENST00000478896 USP3Q9Y6I4 520 aa13.9□□□□□ -0.18
VCL-205ENST00000478896 SLC12A8A0AV02 714 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 NPC1O15118 1278 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 PENKP01210 267 aaPredicted RBP13.89□□□□□ -0.19
VCL-205ENST00000478896 KLKB1P03952 638 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 EPB41P11171 864 aaKnown RBP13.89□□□□□ -0.19
VCL-205ENST00000478896 MAOBP27338 520 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 GTF2H1P32780 548 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 IL12RB1P42701 662 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 YWHAGP61981 247 aaKnown RBP eCLIP13.89□□□□□ -0.19
VCL-205ENST00000478896 E2F5Q15329 346 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 GEN1Q17RS7 908 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 FYB2Q5VWT5 728 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 PIGZQ86VD9 579 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 CACUL1Q86Y37 369 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 GUF1Q8N442 669 aaKnown RBP13.89□□□□□ -0.19
VCL-205ENST00000478896 ZNF276Q8N554 614 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 TTC39CQ8N584 583 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 KDF1Q8NAX2 398 aaPredicted RBP13.89□□□□□ -0.19
VCL-205ENST00000478896 FBXL13Q8NEE6 735 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 DDI1Q8WTU0 396 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 GATA6Q92908 595 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 TOE1Q96GM8 510 aaKnown RBP13.89□□□□□ -0.19
VCL-205ENST00000478896 CCDC34Q96HJ3 373 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 TMEM176AQ96HP8 235 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 ZNF419Q96HQ0 510 aaPredicted RBP13.89□□□□□ -0.19
VCL-205ENST00000478896 CIPCQ9C0C6 399 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 MIR1-1HGQ9H1L0 117 aa13.89□□□□□ -0.19
VCL-205ENST00000478896 CISHQ9NSE2 258 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms