RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 MYH10P35580 1976 aa18.11■□□□□ 0.49
VIM-204ENST00000478746 ASH1LQ9NR48 2969 aaKnown RBP18.11■□□□□ 0.49
VIM-204ENST00000478746 CLIC2O15247 247 aa18.1■□□□□ 0.49
VIM-204ENST00000478746 CLSTN1O94985 981 aa18.1■□□□□ 0.49
VIM-204ENST00000478746 CYP2J2P51589 502 aa18.1■□□□□ 0.49
VIM-204ENST00000478746 AFF3P51826 1226 aaKnown RBP18.1■□□□□ 0.49
VIM-204ENST00000478746 MAP3K7CLP57077 242 aa18.1■□□□□ 0.49
VIM-204ENST00000478746 ENPP2Q13822 863 aa18.1■□□□□ 0.49
VIM-204ENST00000478746 CCDC157Q569K6 752 aa18.1■□□□□ 0.49
VIM-204ENST00000478746 XXYLT1Q8NBI6 393 aa18.1■□□□□ 0.49
VIM-204ENST00000478746 ZNF507Q8TCN5 953 aa18.1■□□□□ 0.49
VIM-204ENST00000478746 DCBLD2Q96PD2 775 aa18.1■□□□□ 0.49
VIM-204ENST00000478746 CSNK1G1Q9HCP0 422 aa18.1■□□□□ 0.49
VIM-204ENST00000478746 AGPAT3Q9NRZ7 376 aa18.1■□□□□ 0.49
VIM-204ENST00000478746 OSER1Q9NX31 292 aa18.1■□□□□ 0.49
VIM-204ENST00000478746 SCML2Q9UQR0 700 aa18.1■□□□□ 0.49
VIM-204ENST00000478746 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.1■□□□□ 0.49
VIM-204ENST00000478746 A0A087X0B3 334 aa18.09■□□□□ 0.49
VIM-204ENST00000478746 EIF3DO15371 548 aaKnown RBP eCLIP18.09■□□□□ 0.49
VIM-204ENST00000478746 TGFB1I1O43294 461 aa18.09■□□□□ 0.49
VIM-204ENST00000478746 IGLV3-19P01714 112 aa18.09■□□□□ 0.49
VIM-204ENST00000478746 PRB1P04280 392 aa18.09■□□□□ 0.49
VIM-204ENST00000478746 ABCG1P45844 678 aa18.09■□□□□ 0.49
VIM-204ENST00000478746 E2F5Q15329 346 aa18.09■□□□□ 0.49
VIM-204ENST00000478746 SMAD1Q15797 465 aaKnown RBP18.09■□□□□ 0.49
VIM-204ENST00000478746 GEN1Q17RS7 908 aa18.09■□□□□ 0.49
VIM-204ENST00000478746 KIF19Q2TAC6 998 aa18.09■□□□□ 0.49
VIM-204ENST00000478746 ZNF667Q5HYK9 610 aa18.09■□□□□ 0.49
VIM-204ENST00000478746 Q6ZNB5 142 aa18.09■□□□□ 0.49
VIM-204ENST00000478746 FAM124AQ86V42 546 aa18.09■□□□□ 0.49
VIM-204ENST00000478746 ENGASEQ8NFI3 743 aa18.09■□□□□ 0.49
VIM-204ENST00000478746 SLC2A14Q8TDB8 520 aa18.09■□□□□ 0.49
VIM-204ENST00000478746 SNX19Q92543 992 aa18.09■□□□□ 0.49
VIM-204ENST00000478746 PCED1AQ9H1Q7 454 aa18.09■□□□□ 0.49
VIM-204ENST00000478746 VRTNQ9H8Y1 702 aa18.09■□□□□ 0.49
VIM-204ENST00000478746 DNMT3LQ9UJW3 386 aa18.09■□□□□ 0.49
VIM-204ENST00000478746 NUDT5Q9UKK9 219 aa18.09■□□□□ 0.49
VIM-204ENST00000478746 SNX11Q9Y5W9 270 aa18.09■□□□□ 0.49
VIM-204ENST00000478746 E9PAM4 449 aa18.08■□□□□ 0.48
VIM-204ENST00000478746 TK2O00142 265 aa18.08■□□□□ 0.48
VIM-204ENST00000478746 MDM4O15151 490 aa18.08■□□□□ 0.48
VIM-204ENST00000478746 RARGP13631 454 aa18.08■□□□□ 0.48
VIM-204ENST00000478746 CCDC130P13994 396 aa18.08■□□□□ 0.48
VIM-204ENST00000478746 GRK6P43250 576 aa18.08■□□□□ 0.48
VIM-204ENST00000478746 MFAP3P55082 362 aa18.08■□□□□ 0.48
VIM-204ENST00000478746 CEBPZQ03701 1054 aaKnown RBP18.08■□□□□ 0.48
VIM-204ENST00000478746 TEAD4Q15561 434 aa18.08■□□□□ 0.48
VIM-204ENST00000478746 ZNF699Q32M78 642 aa18.08■□□□□ 0.48
VIM-204ENST00000478746 C10orf120Q5SQS8 335 aa18.08■□□□□ 0.48
VIM-204ENST00000478746 KLHDC10Q6PID8 442 aa18.08■□□□□ 0.48
VIM-204ENST00000478746 SCARA5Q6ZMJ2 495 aa18.08■□□□□ 0.48
VIM-204ENST00000478746 PDILTQ8N807 584 aa18.08■□□□□ 0.48
VIM-204ENST00000478746 PIP4K2CQ8TBX8 421 aa18.08■□□□□ 0.48
VIM-204ENST00000478746 SLC39A7Q92504 469 aa18.08■□□□□ 0.48
VIM-204ENST00000478746 P2RY11Q96G91 374 aa18.08■□□□□ 0.48
VIM-204ENST00000478746 LRRC27Q9C0I9 530 aa18.08■□□□□ 0.48
VIM-204ENST00000478746 ANKRD6Q9Y2G4 727 aa18.08■□□□□ 0.48
VIM-204ENST00000478746 ZNF510Q9Y2H8 683 aa18.08■□□□□ 0.48
VIM-204ENST00000478746 VPS37CA5D8V6 355 aaPredicted RBP18.07■□□□□ 0.48
VIM-204ENST00000478746 KCNK3O14649 394 aa18.07■□□□□ 0.48
VIM-204ENST00000478746 CYP26A1O43174 497 aa18.07■□□□□ 0.48
VIM-204ENST00000478746 STC2O76061 302 aa18.07■□□□□ 0.48
VIM-204ENST00000478746 PENKP01210 267 aaPredicted RBP18.07■□□□□ 0.48
VIM-204ENST00000478746 CHKAP35790 457 aa18.07■□□□□ 0.48
VIM-204ENST00000478746 COPAP53621 1224 aa18.07■□□□□ 0.48
VIM-204ENST00000478746 SNRPFP62306 86 aaKnown RBP18.07■□□□□ 0.48
VIM-204ENST00000478746 BIRC3Q13489 604 aa18.07■□□□□ 0.48
VIM-204ENST00000478746 ZNF234Q14588 700 aa18.07■□□□□ 0.48
VIM-204ENST00000478746 PTPRNQ16849 979 aa18.07■□□□□ 0.48
VIM-204ENST00000478746 BMT2Q1RMZ1 405 aa18.07■□□□□ 0.48
VIM-204ENST00000478746 FYB2Q5VWT5 728 aa18.07■□□□□ 0.48
VIM-204ENST00000478746 DHRS13Q6UX07 377 aa18.07■□□□□ 0.48
VIM-204ENST00000478746 EPM2AIP1Q7L775 607 aaPredicted RBP18.07■□□□□ 0.48
VIM-204ENST00000478746 CACUL1Q86Y37 369 aa18.07■□□□□ 0.48
VIM-204ENST00000478746 CRYBG2Q8N1P7 616 aa18.07■□□□□ 0.48
VIM-204ENST00000478746 ELMO3Q96BJ8 720 aa18.07■□□□□ 0.48
VIM-204ENST00000478746 GZF1Q9H116 711 aaPredicted RBP18.07■□□□□ 0.48
VIM-204ENST00000478746 SDCBP2Q9H190 292 aa18.07■□□□□ 0.48
VIM-204ENST00000478746 NMUR1Q9HB89 426 aa18.07■□□□□ 0.48
VIM-204ENST00000478746 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.07■□□□□ 0.48
VIM-204ENST00000478746 ELOVL2Q9NXB9 296 aa18.07■□□□□ 0.48
VIM-204ENST00000478746 KALRNO60229 2985 aa18.07■□□□□ 0.48
VIM-204ENST00000478746 A0A1W2PQH9 124 aa18.06■□□□□ 0.48
VIM-204ENST00000478746 CD2BP2O95400 341 aaKnown RBP18.06■□□□□ 0.48
VIM-204ENST00000478746 EPHX1P07099 455 aa18.06■□□□□ 0.48
VIM-204ENST00000478746 HLA-EP13747 358 aa18.06■□□□□ 0.48
VIM-204ENST00000478746 ORC1Q13415 861 aa18.06■□□□□ 0.48
VIM-204ENST00000478746 NCOA4Q13772 614 aa18.06■□□□□ 0.48
VIM-204ENST00000478746 GPRIN1Q7Z2K8 1008 aa18.06■□□□□ 0.48
VIM-204ENST00000478746 TMPRSS12Q86WS5 348 aa18.06■□□□□ 0.48
VIM-204ENST00000478746 NELFCDQ8IXH7 590 aa18.06■□□□□ 0.48
VIM-204ENST00000478746 C12orf29Q8N999 325 aa18.06■□□□□ 0.48
VIM-204ENST00000478746 IGSF8Q969P0 613 aa18.06■□□□□ 0.48
VIM-204ENST00000478746 PIWIL1Q96J94 861 aaKnown RBP18.06■□□□□ 0.48
VIM-204ENST00000478746 C6orf106Q9H6K1 298 aaPredicted RBP18.06■□□□□ 0.48
VIM-204ENST00000478746 FAM49BQ9NUQ9 324 aa18.06■□□□□ 0.48
VIM-204ENST00000478746 SLCO1B1Q9Y6L6 691 aa18.06■□□□□ 0.48
VIM-204ENST00000478746 PLK4O00444 970 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 PCDHGA12O60330 932 aa18.05■□□□□ 0.48
VIM-204ENST00000478746 KLKB1P03952 638 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms