RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 FANCCQ00597 558 aa15.33■□□□□ 0.04
USP11-207ENST00000478596 PPP3CAQ08209 521 aa15.33■□□□□ 0.04
USP11-207ENST00000478596 MYO1EQ12965 1108 aa15.33■□□□□ 0.04
USP11-207ENST00000478596 NCOA4Q13772 614 aa15.33■□□□□ 0.04
USP11-207ENST00000478596 ZNF699Q32M78 642 aa15.33■□□□□ 0.04
USP11-207ENST00000478596 TDRD10Q5VZ19 366 aaKnown RBP15.33■□□□□ 0.04
USP11-207ENST00000478596 TRAPPC11Q7Z392 1133 aa15.33■□□□□ 0.04
USP11-207ENST00000478596 SFTPA1Q8IWL2 248 aa15.33■□□□□ 0.04
USP11-207ENST00000478596 C1orf127Q8N9H9 656 aa15.33■□□□□ 0.04
USP11-207ENST00000478596 SPPL2BQ8TCT7 592 aa15.33■□□□□ 0.04
USP11-207ENST00000478596 WBP1Q96G27 269 aa15.33■□□□□ 0.04
USP11-207ENST00000478596 CALCOCO1Q9P1Z2 691 aa15.33■□□□□ 0.04
USP11-207ENST00000478596 AGAP1Q9UPQ3 857 aa15.33■□□□□ 0.04
USP11-207ENST00000478596 LGALS16A8MUM7 142 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 TADA3O75528 432 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 WISP1O95388 367 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 HLA-DRAP01903 254 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 NTRK1P04629 796 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 ODC1P11926 461 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 GABRG2P18507 467 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 EIF2DP41214 584 aaKnown RBP15.32■□□□□ 0.04
USP11-207ENST00000478596 UBASH3AP57075 661 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 TNNC1P63316 161 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 UBXN1Q04323 297 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 ZBTB6Q15916 424 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 SV2CQ496J9 727 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 CBWD6Q4V339 395 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 CBWD3Q5JTY5 395 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 CBWD5Q5RIA9 395 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 SYCP2LQ5T4T6 812 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 GBP6Q6ZN66 633 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 SV2AQ7L0J3 742 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 TMEM130Q8N3G9 435 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 FAM181AQ8N9Y4 354 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 FBXL13Q8NEE6 735 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 NXPE2Q96DL1 559 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 SLC22A12Q96S37 553 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 PNKPQ96T60 521 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 TRIM5Q9C035 493 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 HSD3B7Q9H2F3 369 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 PRDM16Q9HAZ2 1276 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 IFNKQ9P0W0 207 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 PCDHGB2Q9Y5G2 931 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 COL6A6A6NMZ7 2263 aa15.32■□□□□ 0.04
USP11-207ENST00000478596 TSC2P49815 1807 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 TEX15Q9BXT5 2789 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 TRAV19A0A0A6YYK7 116 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 B8ZZF3 427 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 FLRT2O43155 660 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 TLX3O43711 291 aaPredicted RBP15.31■□□□□ 0.04
USP11-207ENST00000478596 ZNF217O75362 1048 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 KAT7O95251 611 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 CKMP06732 381 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 CSH1P0DML2 217 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 CSH2P0DML3 217 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 P4HA1P13674 534 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 PAX3P23760 479 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 PNPLA4P41247 253 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 TAF6P49848 677 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 MESP2Q0VG99 397 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 ZACNQ401N2 412 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 EMC10Q5UCC4 262 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 C9orf57Q5W0N0 161 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 SCARA5Q6ZMJ2 495 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 RGL4Q8IZJ4 473 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 SPATA18Q8TC71 538 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 TAS1R2Q8TE23 839 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 SH3RF2Q8TEC5 729 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 CYP2S1Q96SQ9 504 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 CRACR2AQ9BSW2 395 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 TM7SF3Q9NS93 570 aa15.31■□□□□ 0.04
USP11-207ENST00000478596 UXTQ9UBK9 157 aaPredicted RBP15.31■□□□□ 0.04
USP11-207ENST00000478596 MUC22E2RYF6 1773 aaPredicted RBP15.3■□□□□ 0.04
USP11-207ENST00000478596 P4HA2O15460 535 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 APODP05090 189 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 CYP11A1P05108 521 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 GRIA2P42262 883 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 TNFRSF4P43489 277 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 LILRA4P59901 499 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 NOP14P78316 857 aaKnown RBP15.3■□□□□ 0.04
USP11-207ENST00000478596 CLDN10P78369 228 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 LRMPQ12912 555 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 PTPRNQ16849 979 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 EXOC3L4Q17RC7 722 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 MIIPQ5JXC2 388 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 WDR45BQ5MNZ6 344 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 C1orf220Q5T0J3 134 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 LRRC52Q8N7C0 313 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 KIAA1958Q8N8K9 716 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 TTC16Q8NEE8 873 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 SNIP1Q8TAD8 396 aaKnown RBP15.3■□□□□ 0.04
USP11-207ENST00000478596 KCNV2Q8TDN2 545 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 RHBDD1Q8TEB9 315 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 ZNF516Q92618 1163 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 FOXJ1Q92949 421 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 TRMT2BQ96GJ1 504 aaKnown RBP15.3■□□□□ 0.04
USP11-207ENST00000478596 HPDLQ96IR7 371 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 SENP8Q96LD8 212 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 MYRFLQ96LU7 910 aa15.3■□□□□ 0.04
USP11-207ENST00000478596 INTS2Q9H0H0 1204 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms