RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 TAF5Q15542 800 aa27.98■■■□□ 2.07
CCM2-211ENST00000478582 ACAD10Q6JQN1 1059 aa27.98■■■□□ 2.07
CCM2-211ENST00000478582 OSCP1Q8WVF1 389 aa27.98■■■□□ 2.07
CCM2-211ENST00000478582 SLC2A13Q96QE2 648 aa27.98■■■□□ 2.07
CCM2-211ENST00000478582 NELL2Q99435 816 aa27.98■■■□□ 2.07
CCM2-211ENST00000478582 RASAL2Q9UJF2 1139 aa27.98■■■□□ 2.07
CCM2-211ENST00000478582 KIF26AQ9ULI4 1882 aaPredicted RBP27.98■■■□□ 2.07
CCM2-211ENST00000478582 MFAP3LO75121 409 aa27.97■■■□□ 2.07
CCM2-211ENST00000478582 GZMAP12544 262 aa27.97■■■□□ 2.07
CCM2-211ENST00000478582 CD72P21854 359 aa27.97■■■□□ 2.07
CCM2-211ENST00000478582 GSCP56915 257 aaPredicted RBP27.97■■■□□ 2.07
CCM2-211ENST00000478582 PDGFRLQ15198 375 aa27.97■■■□□ 2.07
CCM2-211ENST00000478582 MMS22LQ6ZRQ5 1243 aa27.97■■■□□ 2.07
CCM2-211ENST00000478582 HTR3DQ70Z44 454 aa27.97■■■□□ 2.07
CCM2-211ENST00000478582 MIB1Q86YT6 1006 aa27.97■■■□□ 2.07
CCM2-211ENST00000478582 ATOH1Q92858 354 aaPredicted RBP27.97■■■□□ 2.07
CCM2-211ENST00000478582 LTB4R2Q9NPC1 389 aa27.97■■■□□ 2.07
CCM2-211ENST00000478582 NAALADL1Q9UQQ1 740 aa27.97■■■□□ 2.07
CCM2-211ENST00000478582 HBS1LQ9Y450 684 aaKnown RBP27.97■■■□□ 2.07
CCM2-211ENST00000478582 COL4A3Q01955 1670 aa27.97■■■□□ 2.07
CCM2-211ENST00000478582 FAM170BA6NMN3 283 aa27.96■■■□□ 2.07
CCM2-211ENST00000478582 DDX3XO00571 662 aaKnown RBP eCLIP27.96■■■□□ 2.071e-10■■■□□ 15
CCM2-211ENST00000478582 GREM1O60565 184 aa27.96■■■□□ 2.07
CCM2-211ENST00000478582 C1QBPQ07021 282 aaKnown RBP27.96■■■□□ 2.07
CCM2-211ENST00000478582 UBXN2BQ14CS0 331 aa27.96■■■□□ 2.07
CCM2-211ENST00000478582 C2CD6Q53TS8 623 aa27.96■■■□□ 2.07
CCM2-211ENST00000478582 TDRD12Q587J7 1177 aaKnown RBP27.96■■■□□ 2.07
CCM2-211ENST00000478582 SYPL2Q5VXT5 272 aa27.96■■■□□ 2.07
CCM2-211ENST00000478582 ZNF852Q6ZMS4 543 aa27.96■■■□□ 2.07
CCM2-211ENST00000478582 MON1BQ7L1V2 547 aa27.96■■■□□ 2.07
CCM2-211ENST00000478582 CNGA4Q8IV77 575 aa27.96■■■□□ 2.07
CCM2-211ENST00000478582 ZFYVE19Q96K21 471 aa27.96■■■□□ 2.07
CCM2-211ENST00000478582 C11orf70Q9BRQ4 267 aa27.96■■■□□ 2.07
CCM2-211ENST00000478582 ABHD10Q9NUJ1 306 aa27.96■■■□□ 2.07
CCM2-211ENST00000478582 DUS2Q9NX74 493 aaKnown RBP27.96■■■□□ 2.07
CCM2-211ENST00000478582 ADAM22Q9P0K1 906 aa27.96■■■□□ 2.07
CCM2-211ENST00000478582 WDR35Q9P2L0 1181 aa27.96■■■□□ 2.07
CCM2-211ENST00000478582 TBC1D14Q9P2M4 693 aa27.96■■■□□ 2.07
CCM2-211ENST00000478582 MRPS17Q9Y2R5 130 aaKnown RBP27.96■■■□□ 2.07
CCM2-211ENST00000478582 SH3BP1Q9Y3L3 701 aa27.96■■■□□ 2.07
CCM2-211ENST00000478582 MTF2Q9Y483 593 aaPredicted RBP27.96■■■□□ 2.07
CCM2-211ENST00000478582 CACNA1HO95180 2353 aa27.95■■■□□ 2.07
CCM2-211ENST00000478582 MIA3Q5JRA6 1907 aa27.95■■■□□ 2.06
CCM2-211ENST00000478582 SHISA7A6NL88 538 aa27.95■■■□□ 2.06
CCM2-211ENST00000478582 AKR1B15C9JRZ8 316 aaPredicted RBP27.95■■■□□ 2.06
CCM2-211ENST00000478582 MAN2B1O00754 1011 aa27.95■■■□□ 2.06
CCM2-211ENST00000478582 SLC9A3R1O14745 358 aaPredicted RBP27.95■■■□□ 2.06
CCM2-211ENST00000478582 CAPN9O14815 690 aa27.95■■■□□ 2.06
CCM2-211ENST00000478582 STC2O76061 302 aa27.95■■■□□ 2.06
CCM2-211ENST00000478582 CALB1P05937 261 aa27.95■■■□□ 2.06
CCM2-211ENST00000478582 KPNA1P52294 538 aaPredicted RBP27.95■■■□□ 2.06
CCM2-211ENST00000478582 WDR59Q6PJI9 974 aa27.95■■■□□ 2.06
CCM2-211ENST00000478582 ARCQ7LC44 396 aa27.95■■■□□ 2.06
CCM2-211ENST00000478582 DQX1Q8TE96 717 aaKnown RBP27.95■■■□□ 2.06
CCM2-211ENST00000478582 WBP2Q969T9 261 aa27.95■■■□□ 2.06
CCM2-211ENST00000478582 OTUB2Q96DC9 234 aa27.95■■■□□ 2.06
CCM2-211ENST00000478582 VCPIP1Q96JH7 1222 aa27.95■■■□□ 2.06
CCM2-211ENST00000478582 ARHGAP20Q9P2F6 1191 aa27.95■■■□□ 2.06
CCM2-211ENST00000478582 SFMBT1Q9UHJ3 866 aa27.95■■■□□ 2.06
CCM2-211ENST00000478582 TICRRQ7Z2Z1 1910 aa27.94■■■□□ 2.06
CCM2-211ENST00000478582 SLC12A8A0AV02 714 aa27.94■■■□□ 2.06
CCM2-211ENST00000478582 DAB1O75553 588 aa27.94■■■□□ 2.06
CCM2-211ENST00000478582 GLULP15104 373 aa27.94■■■□□ 2.06
CCM2-211ENST00000478582 MLLT6P55198 1093 aaPredicted RBP27.94■■■□□ 2.06
CCM2-211ENST00000478582 ADKP55263 362 aaKnown RBP27.94■■■□□ 2.06
CCM2-211ENST00000478582 NNTQ13423 1086 aa27.94■■■□□ 2.06
CCM2-211ENST00000478582 ANGPT1Q15389 498 aa27.94■■■□□ 2.06
CCM2-211ENST00000478582 TRIP4Q15650 581 aaPredicted RBP27.94■■■□□ 2.06
CCM2-211ENST00000478582 TSR1Q2NL82 804 aaKnown RBP27.94■■■□□ 2.06
CCM2-211ENST00000478582 FAM102AQ5T9C2 384 aaPredicted RBP27.94■■■□□ 2.06
CCM2-211ENST00000478582 VPS36Q86VN1 386 aa27.94■■■□□ 2.06
CCM2-211ENST00000478582 DEFB106AQ8N104 65 aa27.94■■■□□ 2.06
CCM2-211ENST00000478582 TTC16Q8NEE8 873 aa27.94■■■□□ 2.06
CCM2-211ENST00000478582 CSGALNACT1Q8TDX6 532 aa27.94■■■□□ 2.06
CCM2-211ENST00000478582 PLD4Q96BZ4 506 aa27.94■■■□□ 2.06
CCM2-211ENST00000478582 PHOX2BQ99453 314 aa27.94■■■□□ 2.06
CCM2-211ENST00000478582 FAM86C1Q9NVL1 165 aa27.94■■■□□ 2.06
CCM2-211ENST00000478582 ZNHIT6Q9NWK9 470 aaKnown RBP27.94■■■□□ 2.06
CCM2-211ENST00000478582 TMEM59LQ9UK28 342 aa27.94■■■□□ 2.06
CCM2-211ENST00000478582 LSM7Q9UK45 103 aaKnown RBP27.94■■■□□ 2.06
CCM2-211ENST00000478582 COL4A2P08572 1712 aa27.94■■■□□ 2.06
CCM2-211ENST00000478582 FAM170AA1A519 330 aa27.93■■■□□ 2.06
CCM2-211ENST00000478582 NCAM2O15394 837 aa27.93■■■□□ 2.06
CCM2-211ENST00000478582 PLEKP08567 350 aaPredicted RBP27.93■■■□□ 2.06
CCM2-211ENST00000478582 IRF1P10914 325 aa27.93■■■□□ 2.06
CCM2-211ENST00000478582 TARSP26639 723 aaKnown RBP27.93■■■□□ 2.06
CCM2-211ENST00000478582 IFNAR2P48551 515 aa27.93■■■□□ 2.06
CCM2-211ENST00000478582 EML3Q32P44 896 aa27.93■■■□□ 2.06
CCM2-211ENST00000478582 DCAF6Q58WW2 860 aa27.93■■■□□ 2.06
CCM2-211ENST00000478582 Q6ZNB5 142 aa27.93■■■□□ 2.06
CCM2-211ENST00000478582 ALYREFQ86V81 257 aaKnown RBP27.93■■■□□ 2.06
CCM2-211ENST00000478582 MCOLN2Q8IZK6 566 aa27.93■■■□□ 2.06
CCM2-211ENST00000478582 DCLK3Q9C098 648 aa27.93■■■□□ 2.06
CCM2-211ENST00000478582 LINC00597Q9H2U6 94 aa27.93■■■□□ 2.06
CCM2-211ENST00000478582 HPS4Q9NQG7 708 aa27.93■■■□□ 2.06
CCM2-211ENST00000478582 TAS2R14Q9NYV8 317 aa27.93■■■□□ 2.06
CCM2-211ENST00000478582 ADAMTS1Q9UHI8 967 aa27.93■■■□□ 2.06
CCM2-211ENST00000478582 WNT6Q9Y6F9 365 aa27.93■■■□□ 2.06
CCM2-211ENST00000478582 GRAP2O75791 330 aa27.92■■■□□ 2.06
CCM2-211ENST00000478582 IGLV3-25P01717 112 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms