RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 RCCD1A6NED2 376 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 C19orf67A6NJJ6 358 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 DPYSL4O14531 572 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 CAPN9O14815 690 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 MSI1O43347 362 aaKnown RBP20.81■□□□□ 0.92
ACTB-210ENST00000477812 GREM1O60565 184 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 IGLV3-27P01718 113 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 PTPN9P43378 593 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 ZNF252P-AS1Q0IIN9 211 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 NNTQ13423 1086 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 ZNF77Q15935 545 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 SLC25A52Q3SY17 297 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 CCDC14Q49A88 953 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 TANGO2Q6ICL3 276 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 MIB1Q86YT6 1006 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 ADAM32Q8TC27 787 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 RXFP2Q8WXD0 754 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 CTNNBL1Q8WYA6 563 aaPredicted RBP20.81■□□□□ 0.92
ACTB-210ENST00000477812 FGF14Q92915 247 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 DESI2Q9BSY9 194 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 NACA2Q9H009 215 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 KIF9Q9HAQ2 790 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 GKN1Q9NS71 199 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 OBP2AQ9NY56 170 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 MYO1AQ9UBC5 1043 aa20.81■□□□□ 0.92
ACTB-210ENST00000477812 KIF26AQ9ULI4 1882 aaPredicted RBP20.81■□□□□ 0.92
ACTB-210ENST00000477812 IRAK2O43187 625 aa20.8■□□□□ 0.92
ACTB-210ENST00000477812 ECI2O75521 394 aa20.8■□□□□ 0.92
ACTB-210ENST00000477812 TRUB2O95900 331 aaKnown RBP20.8■□□□□ 0.92
ACTB-210ENST00000477812 TCEAL1Q15170 157 aa20.8■□□□□ 0.92
ACTB-210ENST00000477812 PLCD3Q8N3E9 789 aa20.8■□□□□ 0.92
ACTB-210ENST00000477812 CELF5Q8N6W0 485 aaKnown RBP20.8■□□□□ 0.92
ACTB-210ENST00000477812 ST13P5Q8NFI4 369 aaPredicted RBP20.8■□□□□ 0.92
ACTB-210ENST00000477812 SH3RF2Q8TEC5 729 aa20.8■□□□□ 0.92
ACTB-210ENST00000477812 FNIP1Q8TF40 1166 aa20.8■□□□□ 0.92
ACTB-210ENST00000477812 WBP2Q969T9 261 aa20.8■□□□□ 0.92
ACTB-210ENST00000477812 ELSPBP1Q96BH3 223 aa20.8■□□□□ 0.92
ACTB-210ENST00000477812 PGAP3Q96FM1 320 aaPredicted RBP20.8■□□□□ 0.92
ACTB-210ENST00000477812 CFAP57Q96MR6 1250 aa20.8■□□□□ 0.92
ACTB-210ENST00000477812 TBCBQ99426 244 aa20.8■□□□□ 0.92
ACTB-210ENST00000477812 NUP85Q9BW27 656 aa20.8■□□□□ 0.92
ACTB-210ENST00000477812 MRPL47Q9HD33 250 aaKnown RBP20.8■□□□□ 0.92
ACTB-210ENST00000477812 RRN3Q9NYV6 651 aa20.8■□□□□ 0.92
ACTB-210ENST00000477812 STAP1Q9ULZ2 295 aa20.8■□□□□ 0.92
ACTB-210ENST00000477812 TFR2Q9UP52 801 aa20.8■□□□□ 0.92
ACTB-210ENST00000477812 HBS1LQ9Y450 684 aaKnown RBP20.8■□□□□ 0.92
ACTB-210ENST00000477812 LEFTY2O00292 366 aa20.79■□□□□ 0.92
ACTB-210ENST00000477812 STC2O76061 302 aa20.79■□□□□ 0.92
ACTB-210ENST00000477812 PDGFRAP16234 1089 aa20.79■□□□□ 0.92
ACTB-210ENST00000477812 GPD1P21695 349 aa20.79■□□□□ 0.92
ACTB-210ENST00000477812 ZNF143P52747 638 aaPredicted RBP20.79■□□□□ 0.92
ACTB-210ENST00000477812 TRIP4Q15650 581 aaPredicted RBP20.79■□□□□ 0.92
ACTB-210ENST00000477812 DCUN1D2Q6PH85 259 aa20.79■□□□□ 0.92
ACTB-210ENST00000477812 VITQ6UXI7 678 aa20.79■□□□□ 0.92
ACTB-210ENST00000477812 MTSS1LQ765P7 747 aa20.79■□□□□ 0.92
ACTB-210ENST00000477812 RFFLQ8WZ73 363 aa20.79■□□□□ 0.92
ACTB-210ENST00000477812 CENPIQ92674 756 aaPredicted RBP20.79■□□□□ 0.92
ACTB-210ENST00000477812 SLC39A13Q96H72 371 aa20.79■□□□□ 0.92
ACTB-210ENST00000477812 SERPINB11Q96P15 392 aa20.79■□□□□ 0.92
ACTB-210ENST00000477812 RPP25Q9BUL9 199 aaKnown RBP20.79■□□□□ 0.92
ACTB-210ENST00000477812 PLA2G2FQ9BZM2 168 aa20.79■□□□□ 0.92
ACTB-210ENST00000477812 ZFP14Q9HCL3 533 aa20.79■□□□□ 0.92
ACTB-210ENST00000477812 UVRAGQ9P2Y5 699 aa20.79■□□□□ 0.92
ACTB-210ENST00000477812 TLR6Q9Y2C9 796 aa20.79■□□□□ 0.92
ACTB-210ENST00000477812 ADGRG1Q9Y653 693 aa20.79■□□□□ 0.92
ACTB-210ENST00000477812 NUMBLQ9Y6R0 609 aa20.79■□□□□ 0.92
ACTB-210ENST00000477812 SLC12A8A0AV02 714 aa20.78■□□□□ 0.92
ACTB-210ENST00000477812 HEPACAM2A8MVW5 462 aa20.78■□□□□ 0.92
ACTB-210ENST00000477812 MTA2O94776 668 aa20.78■□□□□ 0.92
ACTB-210ENST00000477812 ENDOD1O94919 500 aa20.78■□□□□ 0.92
ACTB-210ENST00000477812 IPO7O95373 1038 aaKnown RBP20.78■□□□□ 0.92
ACTB-210ENST00000477812 PTMAP06454 111 aaKnown RBP20.78■□□□□ 0.92
ACTB-210ENST00000477812 SDC4P31431 198 aa20.78■□□□□ 0.92
ACTB-210ENST00000477812 VAV2P52735 878 aa20.78■□□□□ 0.92
ACTB-210ENST00000477812 COG7P83436 770 aa20.78■□□□□ 0.92
ACTB-210ENST00000477812 C15orf59Q2T9L4 293 aaPredicted RBP20.78■□□□□ 0.92
ACTB-210ENST00000477812 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.78■□□□□ 0.927e-13■■■■□ 19.9
ACTB-210ENST00000477812 KIAA1958Q8N8K9 716 aa20.78■□□□□ 0.92
ACTB-210ENST00000477812 FCRL2Q96LA5 508 aaPredicted RBP20.78■□□□□ 0.92
ACTB-210ENST00000477812 KXD1Q9BQD3 176 aa20.78■□□□□ 0.92
ACTB-210ENST00000477812 CNPY3Q9BT09 278 aa20.78■□□□□ 0.92
ACTB-210ENST00000477812 LACRTQ9GZZ8 138 aa20.78■□□□□ 0.92
ACTB-210ENST00000477812 FAM204AQ9H8W3 233 aa20.78■□□□□ 0.92
ACTB-210ENST00000477812 LUC7LQ9NQ29 371 aaKnown RBP20.78■□□□□ 0.92
ACTB-210ENST00000477812 PIGVQ9NUD9 493 aa20.78■□□□□ 0.92
ACTB-210ENST00000477812 DDIT4Q9NX09 232 aa20.78■□□□□ 0.92
ACTB-210ENST00000477812 CFAP97Q9P2B7 532 aa20.78■□□□□ 0.92
ACTB-210ENST00000477812 LIMD1Q9UGP4 676 aa20.78■□□□□ 0.92
ACTB-210ENST00000477812 M0QYT0 321 aa20.77■□□□□ 0.92
ACTB-210ENST00000477812 PJA2O43164 708 aa20.77■□□□□ 0.92
ACTB-210ENST00000477812 CCP110O43303 1012 aa20.77■□□□□ 0.92
ACTB-210ENST00000477812 KLKB1P03952 638 aa20.77■□□□□ 0.92
ACTB-210ENST00000477812 SULT1E1P49888 294 aa20.77■□□□□ 0.92
ACTB-210ENST00000477812 KRT83P78385 493 aa20.77■□□□□ 0.92
ACTB-210ENST00000477812 RING1Q06587 406 aa20.77■□□□□ 0.92
ACTB-210ENST00000477812 FCHO2Q0JRZ9 810 aa20.77■□□□□ 0.92
ACTB-210ENST00000477812 RAB6CQ53S08 254 aa20.77■□□□□ 0.92
ACTB-210ENST00000477812 SH3PXD2AQ5TCZ1 1133 aa20.77■□□□□ 0.92
ACTB-210ENST00000477812 Q6ZNB5 142 aa20.77■□□□□ 0.92
ACTB-210ENST00000477812 DDX42Q86XP3 938 aaKnown RBP eCLIP20.77■□□□□ 0.922e-24■□□□□ 9.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms