RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 LUZP4Q9P127 313 aa5.32□□□□□ -1.56
SMNDC1-205ENST00000477763 SCAF8Q9UPN6 1271 aaKnown RBP5.32□□□□□ -1.56
SMNDC1-205ENST00000477763 FNDC1Q4ZHG4 1894 aaPredicted RBP5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 A8MVJ9 347 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 TARM1B6A8C7 271 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 J3KTA2 159 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 NPHP1O15259 732 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 DNPH1O43598 174 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 PMPCBO75439 489 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 WDR47O94967 919 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 HSD3B1P14060 373 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 CREB1P16220 341 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 ENGP17813 658 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 GKP32189 559 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 RENBPP51606 427 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 DGKQP52824 942 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 ACOX1Q15067 660 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 P3H1Q32P28 736 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 C4orf46Q504U0 113 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 PCID2Q5JVF3 399 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 DENND2CQ68D51 928 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 FCRLBQ6BAA4 426 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 SUMO4Q6EEV6 95 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 RINT1Q6NUQ1 792 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 SYCE2Q6PIF2 218 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 LDHAL6AQ6ZMR3 332 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 PTF1AQ7RTS3 328 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 AMIGO2Q86SJ2 522 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 ANKRD18AQ8IVF6 992 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 GALNT15Q8N3T1 639 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 METTL25Q8N6Q8 603 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 OTUD7AQ8TE49 926 aaPredicted RBP5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 WDR24Q96S15 920 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 EIF3CQ99613 913 aaKnown RBP5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 FAM167BQ9BTA0 163 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 NFU1Q9UMS0 254 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 DGKBQ9Y6T7 804 aa5.31□□□□□ -1.56
SMNDC1-205ENST00000477763 AP4M1O00189 453 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 CES2O00748 559 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 PCDH17O14917 1159 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 IRAK2O43187 625 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 ACTL6BO94805 426 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 MYCLP12524 364 aaPredicted RBP5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 HTR7P34969 479 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 GSTM5P46439 218 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 ARL4CP56559 192 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 PPFIA1Q13136 1202 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 FHL3Q13643 280 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 TANGO2Q6ICL3 276 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 SULT6B1Q6IMI4 303 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 DPY19L2P1Q6NXN4 242 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 ZNF575Q86XF7 245 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 NTN5Q8WTR8 489 aaPredicted RBP5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 OVCA2Q8WZ82 227 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 REPS1Q96D71 796 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 PRR25Q96S07 402 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 RTKNQ9BST9 563 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 SAYSD1Q9NPB0 183 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 MGAT4CQ9UBM8 478 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 AMFRQ9UKV5 643 aa5.3□□□□□ -1.56
SMNDC1-205ENST00000477763 AOX1Q06278 1338 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 TMPRSS11DO60235 418 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 PBX1P40424 430 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 PROK1P58294 105 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 AP2B1P63010 937 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 E2F1Q01094 437 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 MTAPQ13126 283 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 SEMA3BQ13214 749 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 POSTNQ15063 836 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 TIGD6Q17RP2 521 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 TMEM196Q5HYL7 178 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 JMJD6Q6NYC1 403 aaPredicted RBP5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 ZNF788Q6ZQV5 615 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 RINLQ6ZS11 566 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 P3H2Q8IVL5 708 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 SLC44A2Q8IWA5 706 aaPredicted RBP5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 SFTPA1Q8IWL2 248 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 STT3BQ8TCJ2 826 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 HASPINQ8TF76 798 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 LENG8Q96PV6 779 aaPredicted RBP5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 BRD8Q9H0E9 1235 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 SNX15Q9NRS6 342 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 SERGEFQ9UGK8 458 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 PCDHGB3Q9Y5G1 929 aa5.29□□□□□ -1.56
SMNDC1-205ENST00000477763 HMX3A6NHT5 357 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 EFCAB8A8MWE9 144 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 H7C1Q1 480 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 IPO5O00410 1097 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 SPRY2O43597 315 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 CBFA2T3O75081 653 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 RBMXL2O75526 392 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 TAF5LO75529 589 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 ZNF37AP17032 561 aaPredicted RBP5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 DRD1P21728 446 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 MMP8P22894 467 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 ADRA1DP25100 572 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 AKT1P31749 480 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 CYP4F2P78329 520 aa5.28□□□□□ -1.56
SMNDC1-205ENST00000477763 HOXA4Q00056 320 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms