RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 E4F1Q66K89 784 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-205ENST00000477508 HGSNATQ68CP4 663 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 MMS22LQ6ZRQ5 1243 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 TMC6Q7Z403 805 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 UNC45BQ8IWX7 931 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 SLC30A5Q8TAD4 765 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 RIN3Q8TB24 985 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 SLC2A13Q96QE2 648 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 NELL2Q99435 816 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 ARHGEF3Q9NR81 526 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 TJP2Q9UDY2 1190 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 NAALADL1Q9UQQ1 740 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 FARP1Q9Y4F1 1045 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-205ENST00000477508 KIF26AQ9ULI4 1882 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-205ENST00000477508 TMEM221A6NGB7 291 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 M0R296 226 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 MFAP3LO75121 409 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 RTN2O75298 545 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 DAB1O75553 588 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 LATS1O95835 1130 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 IRF1P10914 325 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 SKILP12757 684 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 MATKP42679 507 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 TAF5Q15542 800 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 MLF2Q15773 248 aaPredicted RBP13.69□□□□□ -0.22
TOP3A-205ENST00000477508 EML3Q32P44 896 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 NUGGCQ68CJ6 796 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 MON1BQ7L1V2 547 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 BMP8AQ7Z5Y6 402 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 RALGPS2Q86X27 583 aaPredicted RBP13.69□□□□□ -0.22
TOP3A-205ENST00000477508 ADGRG2Q8IZP9 1017 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 DEFB106AQ8N104 65 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 DQX1Q8TE96 717 aaKnown RBP13.69□□□□□ -0.22
TOP3A-205ENST00000477508 AZIN2Q96A70 460 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 TRIM11Q96F44 468 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 ASIC4Q96FT7 647 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 ZFYVE19Q96K21 471 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 C11orf70Q9BRQ4 267 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 EPHX3Q9H6B9 360 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 ABHD10Q9NUJ1 306 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.69□□□□□ -0.22
TOP3A-205ENST00000477508 SFMBT1Q9UHJ3 866 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 STAP1Q9ULZ2 295 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 TLR6Q9Y2C9 796 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 MRPS17Q9Y2R5 130 aaKnown RBP13.69□□□□□ -0.22
TOP3A-205ENST00000477508 PAXBP1Q9Y5B6 917 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 WNT6Q9Y6F9 365 aa13.69□□□□□ -0.22
TOP3A-205ENST00000477508 TECTAO75443 2155 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 SSU72P8A0A1W2PR75 194 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 ANKRD62A6NC57 917 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 GOLGA8SH3BPF8 625 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 DDX3XO00571 662 aaKnown RBP eCLIP13.68□□□□□ -0.22
TOP3A-205ENST00000477508 GPR37L1O60883 481 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 ADH1CP00326 375 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 F9P00740 461 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 IGLV3-27P01718 113 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 SLC2A3P11169 496 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 CHKAP35790 457 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 TBX4P57082 545 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 STARD6P59095 220 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 PTP4A2Q12974 167 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 SYPL2Q5VXT5 272 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 ZNF852Q6ZMS4 543 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 Q6ZNB5 142 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 MCOLN2Q8IZK6 566 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 SIX5Q8N196 739 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 C3orf20Q8ND61 904 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 PIWIL1Q96J94 861 aaKnown RBP13.68□□□□□ -0.22
TOP3A-205ENST00000477508 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.68□□□□□ -0.22
TOP3A-205ENST00000477508 IRX2Q9BZI1 471 aaPredicted RBP13.68□□□□□ -0.22
TOP3A-205ENST00000477508 LINC00597Q9H2U6 94 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 MFSD1Q9H3U5 465 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 EBF3Q9H4W6 596 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 ECT2Q9H8V3 914 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 HPS4Q9NQG7 708 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.68□□□□□ -0.22
TOP3A-205ENST00000477508 ADAMTS1Q9UHI8 967 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 SLC12A6Q9UHW9 1150 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 CA14Q9ULX7 337 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 PIAS3Q9Y6X2 628 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 F5P12259 2224 aa13.68□□□□□ -0.22
TOP3A-205ENST00000477508 GREM1O60565 184 aa13.67□□□□□ -0.22
TOP3A-205ENST00000477508 GRAP2O75791 330 aa13.67□□□□□ -0.22
TOP3A-205ENST00000477508 TRUB2O95900 331 aaKnown RBP13.67□□□□□ -0.22
TOP3A-205ENST00000477508 IGLV3-25P01717 112 aa13.67□□□□□ -0.22
TOP3A-205ENST00000477508 FTLP02792 175 aaPredicted RBP13.67□□□□□ -0.22
TOP3A-205ENST00000477508 HMBSP08397 361 aa13.67□□□□□ -0.22
TOP3A-205ENST00000477508 MYBL1P10243 752 aa13.67□□□□□ -0.22
TOP3A-205ENST00000477508 KRT3P12035 628 aa13.67□□□□□ -0.22
TOP3A-205ENST00000477508 ARSAP15289 507 aa13.67□□□□□ -0.22
TOP3A-205ENST00000477508 DESP17661 470 aa13.67□□□□□ -0.22
TOP3A-205ENST00000477508 CDC25BP30305 580 aa13.67□□□□□ -0.22
TOP3A-205ENST00000477508 CORO1AP31146 461 aaKnown RBP13.67□□□□□ -0.22
TOP3A-205ENST00000477508 SLC11A2P49281 568 aa13.67□□□□□ -0.22
TOP3A-205ENST00000477508 RNASE9P60153 205 aaKnown RBP13.67□□□□□ -0.22
TOP3A-205ENST00000477508 TNK2Q07912 1038 aa13.67□□□□□ -0.22
TOP3A-205ENST00000477508 SLC25A52Q3SY17 297 aa13.67□□□□□ -0.22
TOP3A-205ENST00000477508 TRIM68Q6AZZ1 485 aa13.67□□□□□ -0.22
TOP3A-205ENST00000477508 DNAJC24Q6P3W2 148 aa13.67□□□□□ -0.22
TOP3A-205ENST00000477508 SND1Q7KZF4 910 aaKnown RBP eCLIP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms