RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 POLNQ7Z5Q5 900 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 TFAP2DQ7Z6R9 452 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 RPAINQ86UA6 219 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 TRABD2AQ86V40 505 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 SPATA24Q86W54 205 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 NIFKQ9BYG3 293 aaKnown RBP11.38□□□□□ -0.59
COL27A1-204ENST00000477421 CYP4F12Q9HCS2 524 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 NDE1Q9NXR1 346 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 CACNG4Q9UBN1 327 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 MID2Q9UJV3 735 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 E9PBE3 544 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 KLHL41O60662 606 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 APOEP02649 317 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 ATP4AP20648 1035 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 ELF3P78545 371 aaPredicted RBP11.38□□□□□ -0.59
COL27A1-204ENST00000477421 RBBP5Q15291 538 aaKnown RBP11.38□□□□□ -0.59
COL27A1-204ENST00000477421 MGAT5BQ3V5L5 792 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 FSCBQ5H9T9 825 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 TTC8Q8TAM2 541 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 TMA16Q96EY4 203 aaKnown RBP11.38□□□□□ -0.59
COL27A1-204ENST00000477421 ELMO2Q96JJ3 720 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 LRGUKQ96M69 825 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 FBXL18Q96ME1 805 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 SYT15Q9BQS2 421 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 IARS2Q9NSE4 1012 aaKnown RBP11.38□□□□□ -0.59
COL27A1-204ENST00000477421 MYO9BQ13459 2157 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 TOGARAM1Q9Y4F4 1720 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 UBR2Q8IWV8 1755 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 FAM237BA0A1B0GVD1 139 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 SMAPO00193 183 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 SKAP2O75563 359 aaPredicted RBP11.37□□□□□ -0.59
COL27A1-204ENST00000477421 ITGAVP06756 1048 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 CPT1AP50416 773 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 MTFR1Q15390 333 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 PDCD2Q16342 344 aaPredicted RBP11.37□□□□□ -0.59
COL27A1-204ENST00000477421 N4BP2L1Q5TBK1 243 aaPredicted RBP11.37□□□□□ -0.59
COL27A1-204ENST00000477421 MTHFD1LQ6UB35 978 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 FBXO6Q9NRD1 293 aaPredicted RBP11.37□□□□□ -0.59
COL27A1-204ENST00000477421 FAM8A1Q9UBU6 413 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 BCAP29Q9UHQ4 241 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 STRCP1A6NGW2 1772 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 C2CD2LO14523 706 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 STRNO43815 780 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 B4GALT4O60513 344 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 OGDHQ02218 1023 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 SLC10A6Q3KNW5 377 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 FNBP1LQ5T0N5 605 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 TMEM63BQ5T3F8 832 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 RAB44Q7Z6P3 723 aaPredicted RBP11.37□□□□□ -0.59
COL27A1-204ENST00000477421 XYLT1Q86Y38 959 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 CPT1BQ92523 772 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 TRIM56Q9BRZ2 755 aaKnown RBP11.37□□□□□ -0.59
COL27A1-204ENST00000477421 KATNAL1Q9BW62 490 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 PRDM12Q9H4Q4 367 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 VTA1Q9NP79 307 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 ETNK2Q9NVF9 386 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 RBPJLQ9UBG7 517 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 DRG1Q9Y295 367 aaKnown RBP11.37□□□□□ -0.59
COL27A1-204ENST00000477421 CCDC88AQ3V6T2 1871 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 C4AP0C0L4 1744 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 C4BP0C0L5 1744 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 TULP2O00295 520 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 BDNFP23560 247 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 IL1R2P27930 398 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 ZNF235Q14590 738 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 MFSD10Q14728 455 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 SLC4A11Q8NBS3 891 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 CENPTQ96BT3 561 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 EIF2AQ9BY44 585 aaKnown RBP11.37□□□□□ -0.59
COL27A1-204ENST00000477421 ACSS2Q9NR19 701 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 SLC38A7Q9NVC3 462 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 MYH1P12882 1939 aa11.37□□□□□ -0.59
COL27A1-204ENST00000477421 FCHO1O14526 889 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 ALOX15BO15296 676 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 ENDOD1O94919 500 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 PSMB4P28070 264 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 YWHAHQ04917 246 aaPredicted RBP11.36□□□□□ -0.59
COL27A1-204ENST00000477421 SPDYCQ5MJ68 293 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 GLB1LQ6UWU2 654 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 TLCD1Q96CP7 247 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 TBCBQ99426 244 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 NRDE2Q9H7Z3 1164 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 ARHGEF37A1IGU5 675 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 CLGNO14967 610 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 SCNN1GP51170 649 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 KPNA2P52292 529 aaKnown RBP11.36□□□□□ -0.59
COL27A1-204ENST00000477421 HADHBP55084 474 aaKnown RBP11.36□□□□□ -0.59
COL27A1-204ENST00000477421 PPIL2Q13356 520 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 CRELD2Q6UXH1 353 aaPredicted RBP11.36□□□□□ -0.59
COL27A1-204ENST00000477421 RNF148Q8N7C7 305 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 EFHBQ8N7U6 833 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 AGAP11Q8TF27 550 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 DDX1Q92499 740 aaKnown RBP11.36□□□□□ -0.59
COL27A1-204ENST00000477421 SENP8Q96LD8 212 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 SUDS3Q9H7L9 328 aaPredicted RBP11.36□□□□□ -0.59
COL27A1-204ENST00000477421 EPS15L1Q9UBC2 864 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 ANGPTL3Q9Y5C1 460 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 CNTNAP2Q9UHC6 1331 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 A8MUI8 341 aa11.36□□□□□ -0.59
COL27A1-204ENST00000477421 SPTLC1O15269 473 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms