RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 CLTBP09497 229 aa19.08■□□□□ 0.65
VARS2-209ENST00000477288 OTUD4Q01804 1114 aaKnown RBP19.08■□□□□ 0.65
VARS2-209ENST00000477288 MACC1Q6ZN28 852 aa19.08■□□□□ 0.65
VARS2-209ENST00000477288 DEFB132Q7Z7B7 95 aa19.08■□□□□ 0.65
VARS2-209ENST00000477288 CACUL1Q86Y37 369 aa19.08■□□□□ 0.65
VARS2-209ENST00000477288 LRRC34Q8IZ02 419 aa19.08■□□□□ 0.65
VARS2-209ENST00000477288 EXD1Q8NHP7 514 aa19.08■□□□□ 0.65
VARS2-209ENST00000477288 RSPH1Q8WYR4 309 aa19.08■□□□□ 0.65
VARS2-209ENST00000477288 TMEM176AQ96HP8 235 aa19.08■□□□□ 0.65
VARS2-209ENST00000477288 SERAC1Q96JX3 654 aa19.08■□□□□ 0.65
VARS2-209ENST00000477288 FRMD8P1Q9BZ68 369 aaPredicted RBP19.08■□□□□ 0.65
VARS2-209ENST00000477288 EFCAB1Q9HAE3 211 aa19.08■□□□□ 0.65
VARS2-209ENST00000477288 PTPRHQ9HD43 1115 aa19.08■□□□□ 0.65
VARS2-209ENST00000477288 POLLQ9UGP5 575 aa19.08■□□□□ 0.65
VARS2-209ENST00000477288 ATP6V1HQ9UI12 483 aa19.08■□□□□ 0.65
VARS2-209ENST00000477288 DRG1Q9Y295 367 aaKnown RBP19.08■□□□□ 0.65
VARS2-209ENST00000477288 DIP2AQ14689 1571 aa19.08■□□□□ 0.65
VARS2-209ENST00000477288 ARMCX4Q5H9R4 360 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 DGKKQ5KSL6 1271 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 POMGNT2Q8NAT1 580 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 DDHD1Q8NEL9 900 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 HDHD2Q9H0R4 259 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 KCNF1Q9H3M0 494 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 C10orf88Q9H8K7 445 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 SLC40A1Q9NP59 571 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 PDHXO00330 501 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 LY6KQ17RY6 165 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 SH3BP5LQ7L8J4 393 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 EPHX4Q8IUS5 362 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 DNAJB3Q8WWF6 145 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 SERPINB12Q96P63 405 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 USP18Q9UMW8 372 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 ERI2A8K979 691 aaKnown RBP19.08■□□□□ 0.64
VARS2-209ENST00000477288 AGRPO00253 132 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 KPNA6O60684 536 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 COX10Q12887 443 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 BTG3Q14201 252 aaPredicted RBP19.08■□□□□ 0.64
VARS2-209ENST00000477288 BNC2Q6ZN30 1099 aaPredicted RBP19.08■□□□□ 0.64
VARS2-209ENST00000477288 NEK10Q6ZWH5 1172 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 ST13P5Q8NFI4 369 aaPredicted RBP19.08■□□□□ 0.64
VARS2-209ENST00000477288 ATXN3LQ9H3M9 355 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 ELOVL6Q9H5J4 265 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 AVENQ9NQS1 362 aaPredicted RBP19.08■□□□□ 0.64
VARS2-209ENST00000477288 DNAJC16Q9Y2G8 782 aa19.08■□□□□ 0.64
VARS2-209ENST00000477288 PPP1R3GB7ZBB8 358 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 CCNT2O60583 730 aaKnown RBP19.07■□□□□ 0.64
VARS2-209ENST00000477288 KLHL18O94889 574 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 C4BPBP20851 252 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 NOS3P29474 1203 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 HSD17B3P37058 310 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 CCT8P50990 548 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 CCNG1P51959 295 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 NBPF12Q5TAG4 269 aaPredicted RBP19.07■□□□□ 0.64
VARS2-209ENST00000477288 ZNF544Q6NX49 715 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 FLCNQ8NFG4 579 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 EDEM1Q92611 657 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 C19orf60Q96EN9 201 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 SIKE1Q9BRV8 207 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 SPATA31A5Q5VU36 1347 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 SPATA31A7Q8IWB4 1347 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 IFNA14P01570 189 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 CYP11B1P15538 503 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 SEL1L3Q68CR1 1132 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 C19orf18Q8NEA5 215 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 DNAJC5Q9H3Z4 198 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 CXCL8P10145 99 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 PSMC3P17980 439 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 MYL6P60660 151 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 VAC14Q08AM6 782 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 LAMTOR4Q0VGL1 99 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 SPIRE2Q8WWL2 714 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 RNFT2Q96EX2 444 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 MTG1Q9BT17 334 aaPredicted RBP19.07■□□□□ 0.64
VARS2-209ENST00000477288 GPAMQ9HCL2 828 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 SMPD4Q9NXE4 827 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 IQSEC2Q5JU85 1478 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 FRMPD1Q5SYB0 1578 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 PIK3C2BO00750 1634 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 KATNA1O75449 491 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 BAIAP3O94812 1187 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 BST2Q10589 180 aaKnown RBP19.07■□□□□ 0.64
VARS2-209ENST00000477288 PLD1Q13393 1074 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 SLC20A1Q8WUM9 679 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 AHCYL2Q96HN2 611 aaKnown RBP19.07■□□□□ 0.64
VARS2-209ENST00000477288 PGLYRP2Q96PD5 576 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 KCTD14Q9BQ13 255 aaPredicted RBP19.07■□□□□ 0.64
VARS2-209ENST00000477288 PCDHB5Q9Y5E4 795 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 KLHL41O60662 606 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 PLEKP08567 350 aaPredicted RBP19.07■□□□□ 0.64
VARS2-209ENST00000477288 SLC2A4P14672 509 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 NFIAQ12857 509 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 CDK5RAP1Q96SZ6 601 aaKnown RBP19.07■□□□□ 0.64
VARS2-209ENST00000477288 BATF3Q9NR55 127 aa19.07■□□□□ 0.64
VARS2-209ENST00000477288 CNOT3O75175 753 aaKnown RBP19.06■□□□□ 0.64
VARS2-209ENST00000477288 RPLP2P05387 115 aaKnown RBP19.06■□□□□ 0.64
VARS2-209ENST00000477288 PTGISQ16647 500 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 C11orf63Q6NUN7 778 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 TFAP2DQ7Z6R9 452 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 LRRC6Q86X45 466 aa19.06■□□□□ 0.64
VARS2-209ENST00000477288 CCNJLQ8IV13 435 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms