RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 TCP10LQ8TDR4 215 aa17.07■□□□□ 0.32
TMEM53-208ENST00000476724 CENPIQ92674 756 aaPredicted RBP17.07■□□□□ 0.32
TMEM53-208ENST00000476724 APBB2Q92870 758 aa17.07■□□□□ 0.32
TMEM53-208ENST00000476724 LRRC37BQ96QE4 947 aa17.07■□□□□ 0.32
TMEM53-208ENST00000476724 APOL6Q9BWW8 343 aa17.07■□□□□ 0.32
TMEM53-208ENST00000476724 FAM49BQ9NUQ9 324 aa17.07■□□□□ 0.32
TMEM53-208ENST00000476724 HEY1Q9Y5J3 304 aa17.07■□□□□ 0.32
TMEM53-208ENST00000476724 A8MXQ7 604 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 KBTBD13C9JR72 458 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 FAM155BO75949 473 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 AKAP5P24588 427 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 RBL1P28749 1068 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 PNPLA4P41247 253 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 BCAT1P54687 386 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 HDAC4P56524 1084 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 YWHAGP61981 247 aaKnown RBP eCLIP17.06■□□□□ 0.32
TMEM53-208ENST00000476724 SLC18A2Q05940 514 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 PTK7Q13308 1070 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 DPYSL2Q16555 572 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 UBXN11Q5T124 520 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 MAP3K21Q5TCX8 1036 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 LGSNQ5TDP6 509 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 FYB2Q5VWT5 728 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 C9orf57Q5W0N0 161 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 TAF2Q6P1X5 1199 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 FAM228AQ86W67 206 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 IGDCC3Q8IVU1 814 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 NRDE2Q9H7Z3 1164 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 PRDM16Q9HAZ2 1276 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 NOD2Q9HC29 1040 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 CD248Q9HCU0 757 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 SLCO1B3Q9NPD5 702 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 ETNK2Q9NVF9 386 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 CDY2AQ9Y6F7 541 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 CTSHP09668 335 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 NRLP54845 237 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 SOWAHAQ2M3V2 549 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 KBTBD12Q3ZCT8 623 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 GLRA4Q5JXX5 417 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 ZNF560Q96MR9 790 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 C11orf84Q9BUA3 381 aaPredicted RBP17.06■□□□□ 0.32
TMEM53-208ENST00000476724 TRIM6Q9C030 488 aaPredicted RBP17.06■□□□□ 0.32
TMEM53-208ENST00000476724 GPATCH2LQ9NWQ4 482 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 TUBGCP4Q9UGJ1 667 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 ZNF180Q9UJW8 692 aa17.06■□□□□ 0.32
TMEM53-208ENST00000476724 PIRO00625 290 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 PPEF2O14830 753 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 CYP2F1P24903 491 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 ADRA1DP25100 572 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 HOXD10P28358 340 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 MAP2K2P36507 400 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 MRPS6P82932 125 aaKnown RBP17.05■□□□□ 0.32
TMEM53-208ENST00000476724 FBXO47Q5MNV8 452 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 SLC26A11Q86WA9 606 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 RAET1EQ8TD07 263 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 SPOCK2Q92563 424 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 HSFY1Q96LI6 401 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 ADAM33Q9BZ11 813 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 RNF39Q9H2S5 420 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 GDAP2Q9NXN4 497 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 BAIAP2L1Q9UHR4 511 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 NME7Q9Y5B8 376 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 LPXNO60711 386 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 GCATO75600 419 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 GABBR2O75899 941 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 RECQL4O94761 1208 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 TROVE2P10155 538 aaKnown RBP eCLIP17.05■□□□□ 0.32
TMEM53-208ENST00000476724 L1CAMP32004 1257 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 GNL1P36915 607 aaPredicted RBP17.05■□□□□ 0.32
TMEM53-208ENST00000476724 YWHAZP63104 245 aaKnown RBP17.05■□□□□ 0.32
TMEM53-208ENST00000476724 KCNJ2P63252 427 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 CA9Q16790 459 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 WLSQ5T9L3 541 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 TTC39BQ5VTQ0 682 aaPredicted RBP17.05■□□□□ 0.32
TMEM53-208ENST00000476724 OTOAQ7RTW8 1153 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 CHSY1Q86X52 802 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 ZNF276Q8N554 614 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 C10orf82Q8WW14 230 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 APOPT1Q96IL0 206 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 RAB3IPQ96QF0 476 aaPredicted RBP17.05■□□□□ 0.32
TMEM53-208ENST00000476724 MANSC1Q9H8J5 431 aa17.05■□□□□ 0.32
TMEM53-208ENST00000476724 KPNA7A9QM74 516 aa17.04■□□□□ 0.32
TMEM53-208ENST00000476724 C2CD2LO14523 706 aa17.04■□□□□ 0.32
TMEM53-208ENST00000476724 DHRS4L1P0CG22 281 aa17.04■□□□□ 0.32
TMEM53-208ENST00000476724 CST5P28325 142 aaPredicted RBP17.04■□□□□ 0.32
TMEM53-208ENST00000476724 SLC45A4Q5BKX6 768 aa17.04■□□□□ 0.32
TMEM53-208ENST00000476724 PPP6R3Q5H9R7 873 aaPredicted RBP17.04■□□□□ 0.32
TMEM53-208ENST00000476724 BZW1Q7L1Q6 419 aaKnown RBP17.04■□□□□ 0.32
TMEM53-208ENST00000476724 STRADAQ7RTN6 431 aa17.04■□□□□ 0.32
TMEM53-208ENST00000476724 SERINC5Q86VE9 423 aa17.04■□□□□ 0.32
TMEM53-208ENST00000476724 ANKLE1Q8NAG6 615 aa17.04■□□□□ 0.32
TMEM53-208ENST00000476724 C18orf25Q96B23 403 aaPredicted RBP17.04■□□□□ 0.32
TMEM53-208ENST00000476724 TACO1Q9BSH4 297 aaKnown RBP17.04■□□□□ 0.32
TMEM53-208ENST00000476724 B3GNT5Q9BYG0 378 aa17.04■□□□□ 0.32
TMEM53-208ENST00000476724 MYLK2Q9H1R3 596 aa17.04■□□□□ 0.32
TMEM53-208ENST00000476724 ETNK1Q9HBU6 452 aa17.04■□□□□ 0.32
TMEM53-208ENST00000476724 KLK14Q9P0G3 267 aa17.04■□□□□ 0.32
TMEM53-208ENST00000476724 ZC3H7BQ9UGR2 993 aaKnown RBP17.04■□□□□ 0.32
TMEM53-208ENST00000476724 TRPV2Q9Y5S1 764 aa17.04■□□□□ 0.32
TMEM53-208ENST00000476724 KRT37O76014 449 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms