RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 PCDHB2Q9Y5E7 798 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 PCDHGA3Q9Y5H0 932 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 IGKV6D-41A0A0C4DH26 115 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 TISP43B9A030 160 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 TRPA1O75762 1119 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 ZBTB11O95625 1053 aaPredicted RBP10.91□□□□□ -0.66
ABCF1-205ENST00000475993 ATF7P17544 494 aaPredicted RBP10.91□□□□□ -0.66
ABCF1-205ENST00000475993 KCNC4Q03721 635 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 PDK1Q15118 436 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 GRIK5Q16478 980 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 BBS9Q3SYG4 887 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 C2CD6Q53TS8 623 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 DCAF6Q58WW2 860 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 EFCAB3Q8N7B9 438 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 TRIML2Q8N7C3 387 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 SUN5Q8TC36 379 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 TFB1MQ8WVM0 346 aaKnown RBP10.91□□□□□ -0.66
ABCF1-205ENST00000475993 HSPH1Q92598 858 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 DHX38Q92620 1227 aaKnown RBP10.91□□□□□ -0.66
ABCF1-205ENST00000475993 BORCS5Q969J3 196 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 CMTM5Q96DZ9 223 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 SGF29Q96ES7 293 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 KCNK16Q96T55 309 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 RPAP3Q9H6T3 665 aaPredicted RBP10.91□□□□□ -0.66
ABCF1-205ENST00000475993 THAP1Q9NVV9 213 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 RAB20Q9NX57 234 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 HACD3Q9P035 362 aa10.91□□□□□ -0.66
ABCF1-205ENST00000475993 A6NL46 340 aa10.9□□□□□ -0.66
ABCF1-205ENST00000475993 K7EPI3 171 aa10.9□□□□□ -0.66
ABCF1-205ENST00000475993 TMCC2O75069 709 aa10.9□□□□□ -0.66
ABCF1-205ENST00000475993 STAM2O75886 525 aa10.9□□□□□ -0.66
ABCF1-205ENST00000475993 CHEK2O96017 543 aa10.9□□□□□ -0.66
ABCF1-205ENST00000475993 CALCAP01258 141 aa10.9□□□□□ -0.66
ABCF1-205ENST00000475993 EIF2B5Q13144 721 aaKnown RBP10.9□□□□□ -0.66
ABCF1-205ENST00000475993 ZNF829Q3KNS6 432 aaPredicted RBP10.9□□□□□ -0.66
ABCF1-205ENST00000475993 TTC39BQ5VTQ0 682 aaPredicted RBP10.9□□□□□ -0.66
ABCF1-205ENST00000475993 SIGIRRQ6IA17 410 aa10.9□□□□□ -0.66
ABCF1-205ENST00000475993 INTS5Q6P9B9 1019 aaKnown RBP10.9□□□□□ -0.66
ABCF1-205ENST00000475993 CCDC81Q6ZN84 652 aa10.9□□□□□ -0.66
ABCF1-205ENST00000475993 IGDCC3Q8IVU1 814 aa10.9□□□□□ -0.66
ABCF1-205ENST00000475993 CHERPQ8IWX8 916 aaKnown RBP10.9□□□□□ -0.66
ABCF1-205ENST00000475993 REM2Q8IYK8 340 aaPredicted RBP10.9□□□□□ -0.66
ABCF1-205ENST00000475993 ZSWIM2Q8NEG5 633 aa10.9□□□□□ -0.66
ABCF1-205ENST00000475993 SLC35B2Q8TB61 432 aa10.9□□□□□ -0.66
ABCF1-205ENST00000475993 CBWD1Q9BRT8 395 aa10.9□□□□□ -0.66
ABCF1-205ENST00000475993 XAB2Q9HCS7 855 aaKnown RBP10.9□□□□□ -0.66
ABCF1-205ENST00000475993 PALMDQ9NP74 551 aa10.9□□□□□ -0.66
ABCF1-205ENST00000475993 COQ4Q9Y3A0 265 aa10.9□□□□□ -0.66
ABCF1-205ENST00000475993 RNF11Q9Y3C5 154 aa10.9□□□□□ -0.66
ABCF1-205ENST00000475993 SNX9Q9Y5X1 595 aa10.9□□□□□ -0.66
ABCF1-205ENST00000475993 IRS2Q9Y4H2 1338 aa10.9□□□□□ -0.66
ABCF1-205ENST00000475993 TCRBV7S3A2A0A539 114 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 TRIM49D1C9J1S8 452 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 TMEM63AO94886 807 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 KRT75O95678 551 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 BPGMP07738 259 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 PTPN7P35236 360 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 EIF6P56537 245 aaKnown RBP10.9□□□□□ -0.67
ABCF1-205ENST00000475993 MAMLD1Q13495 774 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 PHKG1Q16816 387 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 GPATCH4Q5T3I0 446 aaKnown RBP10.9□□□□□ -0.67
ABCF1-205ENST00000475993 ANGEL2Q5VTE6 544 aaKnown RBP10.9□□□□□ -0.67
ABCF1-205ENST00000475993 WDR78Q5VTH9 848 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 PLA2G4FQ68DD2 849 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 ITPRIPL1Q6GPH6 555 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 ZFP1Q6P2D0 407 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 FRMD7Q6ZUT3 714 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 ARCQ7LC44 396 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 TPH2Q8IWU9 490 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 PDIK1LQ8N165 341 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 OR7G1Q8NGA0 311 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 ZNF512Q96ME7 567 aaPredicted RBP10.9□□□□□ -0.67
ABCF1-205ENST00000475993 ZNF778Q96MU6 729 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 NUF2Q9BZD4 464 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 ZFYVE28Q9HCC9 887 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 PRDM11Q9NQV5 511 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 KCND2Q9NZV8 630 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 CDH7Q9ULB5 785 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 APOBEC2Q9Y235 224 aaKnown RBP10.9□□□□□ -0.67
ABCF1-205ENST00000475993 USTQ9Y2C2 406 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 ZHX2Q9Y6X8 837 aa10.9□□□□□ -0.67
ABCF1-205ENST00000475993 TMEM114B3SHH9 223 aa10.89□□□□□ -0.67
ABCF1-205ENST00000475993 GUCY1B2O75343 617 aa10.89□□□□□ -0.67
ABCF1-205ENST00000475993 H6PDO95479 791 aa10.89□□□□□ -0.67
ABCF1-205ENST00000475993 PSMC3P17980 439 aa10.89□□□□□ -0.67
ABCF1-205ENST00000475993 HMOX2P30519 316 aa10.89□□□□□ -0.67
ABCF1-205ENST00000475993 NSFP46459 744 aaKnown RBP10.89□□□□□ -0.67
ABCF1-205ENST00000475993 SLC5A3P53794 718 aa10.89□□□□□ -0.67
ABCF1-205ENST00000475993 TUBA4AP68366 448 aa10.89□□□□□ -0.67
ABCF1-205ENST00000475993 STX3Q13277 289 aa10.89□□□□□ -0.67
ABCF1-205ENST00000475993 MTM1Q13496 603 aa10.89□□□□□ -0.67
ABCF1-205ENST00000475993 ERFEQ4G0M1 354 aa10.89□□□□□ -0.67
ABCF1-205ENST00000475993 IL23RQ5VWK5 629 aa10.89□□□□□ -0.67
ABCF1-205ENST00000475993 SPOCD1Q6ZMY3 1216 aa10.89□□□□□ -0.67
ABCF1-205ENST00000475993 SLC26A11Q86WA9 606 aa10.89□□□□□ -0.67
ABCF1-205ENST00000475993 CLEC10AQ8IUN9 316 aa10.89□□□□□ -0.67
ABCF1-205ENST00000475993 SLC38A6Q8IZM9 456 aa10.89□□□□□ -0.67
ABCF1-205ENST00000475993 LILRA2Q8N149 483 aa10.89□□□□□ -0.67
ABCF1-205ENST00000475993 CENPSQ8N2Z9 138 aa10.89□□□□□ -0.67
ABCF1-205ENST00000475993 XXYLT1Q8NBI6 393 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms