RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 CNN3Q15417 329 aaKnown RBP5.72□□□□□ -1.49
PRKD3-208ENST00000475912 LY6KQ17RY6 165 aa5.72□□□□□ -1.49
PRKD3-208ENST00000475912 PROSER3Q2NL68 480 aa5.72□□□□□ -1.49
PRKD3-208ENST00000475912 DCAF12L1Q5VU92 463 aa5.72□□□□□ -1.49
PRKD3-208ENST00000475912 APOA5Q6Q788 366 aa5.72□□□□□ -1.49
PRKD3-208ENST00000475912 PARS2Q7L3T8 475 aaKnown RBP5.72□□□□□ -1.49
PRKD3-208ENST00000475912 TCEAL8Q8IYN2 117 aa5.72□□□□□ -1.49
PRKD3-208ENST00000475912 ABRAQ8N0Z2 381 aa5.72□□□□□ -1.49
PRKD3-208ENST00000475912 MAGEB6Q8N7X4 407 aa5.72□□□□□ -1.49
PRKD3-208ENST00000475912 BPIFB1Q8TDL5 484 aa5.72□□□□□ -1.49
PRKD3-208ENST00000475912 TMEM171Q8WVE6 324 aa5.72□□□□□ -1.49
PRKD3-208ENST00000475912 SRP68Q9UHB9 627 aaKnown RBP5.72□□□□□ -1.49
PRKD3-208ENST00000475912 ADAMTS5Q9UNA0 930 aa5.72□□□□□ -1.49
PRKD3-208ENST00000475912 TBC1D30Q9Y2I9 924 aa5.72□□□□□ -1.49
PRKD3-208ENST00000475912 SNX14Q9Y5W7 946 aa5.72□□□□□ -1.49
PRKD3-208ENST00000475912 COL3A1P02461 1466 aaPredicted RBP5.71□□□□□ -1.49
PRKD3-208ENST00000475912 RTL1A6NKG5 1358 aa5.71□□□□□ -1.5
PRKD3-208ENST00000475912 THSD7BQ9C0I4 1608 aa5.71□□□□□ -1.5
PRKD3-208ENST00000475912 CFAP69A5D8W1 941 aa5.71□□□□□ -1.5
PRKD3-208ENST00000475912 A6NNZ2 444 aa5.71□□□□□ -1.5
PRKD3-208ENST00000475912 MYO1FO00160 1098 aa5.71□□□□□ -1.5
PRKD3-208ENST00000475912 MARCH6O60337 910 aa5.71□□□□□ -1.5
PRKD3-208ENST00000475912 DDNO94850 711 aaPredicted RBP5.71□□□□□ -1.5
PRKD3-208ENST00000475912 CTGFP29279 349 aa5.71□□□□□ -1.5
PRKD3-208ENST00000475912 RFC4P35249 363 aa5.71□□□□□ -1.5
PRKD3-208ENST00000475912 MAP2K1Q02750 393 aaPredicted RBP5.71□□□□□ -1.5
PRKD3-208ENST00000475912 RRS1Q15050 365 aaKnown RBP5.71□□□□□ -1.5
PRKD3-208ENST00000475912 PTCHD3Q3KNS1 767 aa5.71□□□□□ -1.5
PRKD3-208ENST00000475912 ARHGAP29Q52LW3 1261 aa5.71□□□□□ -1.5
PRKD3-208ENST00000475912 NXNQ6DKJ4 435 aa5.71□□□□□ -1.5
PRKD3-208ENST00000475912 Q6ZWC4 215 aa5.71□□□□□ -1.5
PRKD3-208ENST00000475912 RP9Q8TA86 221 aaKnown RBP5.71□□□□□ -1.5
PRKD3-208ENST00000475912 SOCS4Q8WXH5 440 aa5.71□□□□□ -1.5
PRKD3-208ENST00000475912 ANKS1AQ92625 1134 aa5.71□□□□□ -1.5
PRKD3-208ENST00000475912 C1orf112Q9NSG2 853 aa5.71□□□□□ -1.5
PRKD3-208ENST00000475912 USP42Q9H9J4 1324 aaKnown RBP5.71□□□□□ -1.5
PRKD3-208ENST00000475912 LTBP1Q14766 1721 aa5.71□□□□□ -1.5
PRKD3-208ENST00000475912 INO80B-WBP1J3KQ70 363 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 PDE8BO95263 885 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 SUMO3P55854 103 aaPredicted RBP5.7□□□□□ -1.5
PRKD3-208ENST00000475912 MLC1Q15049 377 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 SRSF7Q16629 238 aaKnown RBP eCLIP5.7□□□□□ -1.5
PRKD3-208ENST00000475912 DEFB115Q30KQ5 88 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 PRAMEF17Q5VTA0 474 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 SLC9A4Q6AI14 798 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 ZDHHC24Q6UX98 284 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 ZNF66Q6ZN08 573 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 DPY19L3Q6ZPD9 716 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 CAND1Q86VP6 1230 aaKnown RBP5.7□□□□□ -1.5
PRKD3-208ENST00000475912 IZUMO1Q8IYV9 350 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 VGLL2Q8N8G2 317 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 OR56A3Q8NH54 315 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 CYP2W1Q8TAV3 490 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 PPP2R3CQ969Q6 453 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 INO80BQ9C086 356 aaPredicted RBP5.7□□□□□ -1.5
PRKD3-208ENST00000475912 ZNF518BQ9C0D4 1074 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 GBA2Q9HCG7 927 aaPredicted RBP5.7□□□□□ -1.5
PRKD3-208ENST00000475912 SACM1LQ9NTJ5 587 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 TRMT13Q9NUP7 481 aaKnown RBP5.7□□□□□ -1.5
PRKD3-208ENST00000475912 ZSCAN32Q9NX65 697 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 TMOD3Q9NYL9 352 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 FLRT1Q9NZU1 646 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 CPNE7Q9UBL6 633 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 DDX20Q9UHI6 824 aaKnown RBP5.7□□□□□ -1.5
PRKD3-208ENST00000475912 L1RE1Q9UN81 338 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 G3BP2Q9UN86 482 aaKnown RBP5.7□□□□□ -1.5
PRKD3-208ENST00000475912 GABRQQ9UN88 632 aa5.7□□□□□ -1.5
PRKD3-208ENST00000475912 COL5A3P25940 1745 aaPredicted RBP5.7□□□□□ -1.5
PRKD3-208ENST00000475912 PDE4DIPQ5VU43 2346 aa5.69□□□□□ -1.5
PRKD3-208ENST00000475912 TISP43B9A030 160 aa5.69□□□□□ -1.5
PRKD3-208ENST00000475912 BRAFP15056 766 aa5.69□□□□□ -1.5
PRKD3-208ENST00000475912 TM4SF1P30408 202 aa5.69□□□□□ -1.5
PRKD3-208ENST00000475912 SLC44A4Q53GD3 710 aa5.69□□□□□ -1.5
PRKD3-208ENST00000475912 HSP90AB2PQ58FF8 381 aa5.69□□□□□ -1.5
PRKD3-208ENST00000475912 KIAA1614Q5VZ46 1190 aa5.69□□□□□ -1.5
PRKD3-208ENST00000475912 MICU3Q86XE3 530 aa5.69□□□□□ -1.5
PRKD3-208ENST00000475912 LENG8Q96PV6 779 aaPredicted RBP5.69□□□□□ -1.5
PRKD3-208ENST00000475912 DPCDQ9BVM2 203 aaPredicted RBP5.69□□□□□ -1.5
PRKD3-208ENST00000475912 SLC29A3Q9BZD2 475 aa5.69□□□□□ -1.5
PRKD3-208ENST00000475912 A1CFQ9NQ94 594 aaKnown RBP5.69□□□□□ -1.5
PRKD3-208ENST00000475912 RNF7Q9UBF6 113 aa5.69□□□□□ -1.5
PRKD3-208ENST00000475912 TCEAL9Q9UHQ7 104 aa5.69□□□□□ -1.5
PRKD3-208ENST00000475912 ADAMTSL1Q8N6G6 1762 aa5.69□□□□□ -1.5
PRKD3-208ENST00000475912 CARMIL3Q8ND23 1372 aa5.68□□□□□ -1.5
PRKD3-208ENST00000475912 NCAPD2Q15021 1401 aa5.68□□□□□ -1.5
PRKD3-208ENST00000475912 SMG6Q86US8 1419 aaKnown RBP5.68□□□□□ -1.5
PRKD3-208ENST00000475912 WDR91A4D1P6 747 aa5.68□□□□□ -1.5
PRKD3-208ENST00000475912 TSPAN6O43657 245 aa5.68□□□□□ -1.5
PRKD3-208ENST00000475912 TJP3O95049 919 aa5.68□□□□□ -1.5
PRKD3-208ENST00000475912 LATS1O95835 1130 aa5.68□□□□□ -1.5
PRKD3-208ENST00000475912 TUBA4AP68366 448 aa5.68□□□□□ -1.5
PRKD3-208ENST00000475912 E2F1Q01094 437 aa5.68□□□□□ -1.5
PRKD3-208ENST00000475912 CYP1B1Q16678 543 aa5.68□□□□□ -1.5
PRKD3-208ENST00000475912 L1TD1Q5T7N2 865 aaKnown RBP5.68□□□□□ -1.5
PRKD3-208ENST00000475912 TRIM72Q6ZMU5 477 aa5.68□□□□□ -1.5
PRKD3-208ENST00000475912 SPARTQ8N0X7 666 aa5.68□□□□□ -1.5
PRKD3-208ENST00000475912 ABHD11Q8NFV4 315 aa5.68□□□□□ -1.5
PRKD3-208ENST00000475912 DNAJB14Q8TBM8 379 aa5.68□□□□□ -1.5
PRKD3-208ENST00000475912 SUCLG2Q96I99 432 aa5.68□□□□□ -1.5
PRKD3-208ENST00000475912 COG3Q96JB2 828 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms