RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 MON1AQ86VX9 555 aa18.83■□□□□ 0.6
ATG4B-217ENST00000475693 TCEAL8Q8IYN2 117 aa18.83■□□□□ 0.6
ATG4B-217ENST00000475693 SNRNP25Q9BV90 132 aaKnown RBP18.83■□□□□ 0.6
ATG4B-217ENST00000475693 FBXO44Q9H4M3 255 aa18.83■□□□□ 0.6
ATG4B-217ENST00000475693 FAM204AQ9H8W3 233 aa18.83■□□□□ 0.6
ATG4B-217ENST00000475693 ZNF334Q9HCZ1 680 aaPredicted RBP18.83■□□□□ 0.6
ATG4B-217ENST00000475693 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.83■□□□□ 0.6
ATG4B-217ENST00000475693 LZTS1Q9Y250 596 aa18.83■□□□□ 0.6
ATG4B-217ENST00000475693 C3orf70A6NLC5 250 aaPredicted RBP18.82■□□□□ 0.6
ATG4B-217ENST00000475693 H3BNC9 293 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 ADH1AP07327 375 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 PCK1P35558 622 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 KATNAL2Q8IYT4 538 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 HS6ST3Q8IZP7 471 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 RASGEF1CQ8N431 466 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 KREMEN2Q8NCW0 462 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 WDR6Q9NNW5 1121 aaKnown RBP18.82■□□□□ 0.6
ATG4B-217ENST00000475693 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.82■□□□□ 0.6
ATG4B-217ENST00000475693 RWDD3Q9Y3V2 267 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 CARNS1A5YM72 827 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 FSCN2O14926 492 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 SART1O43290 800 aaKnown RBP18.82■□□□□ 0.6
ATG4B-217ENST00000475693 RARGP13631 454 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 CLCN4P51793 760 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 EFEMP1Q12805 493 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 HADHQ16836 314 aaKnown RBP18.82■□□□□ 0.6
ATG4B-217ENST00000475693 PPP6R3Q5H9R7 873 aaPredicted RBP18.82■□□□□ 0.6
ATG4B-217ENST00000475693 BNIPLQ7Z465 357 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 MIB1Q86YT6 1006 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 KCTD6Q8NC69 237 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 SPATA4Q8NEY3 305 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 ZNF512Q96ME7 567 aaPredicted RBP18.82■□□□□ 0.6
ATG4B-217ENST00000475693 SLITRK1Q96PX8 696 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 SLC28A3Q9HAS3 691 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 ABCC13Q9NSE7 274 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 SAE1Q9UBE0 346 aaPredicted RBP18.82■□□□□ 0.6
ATG4B-217ENST00000475693 IRAK3Q9Y616 596 aa18.82■□□□□ 0.6
ATG4B-217ENST00000475693 FAM92AA1XBS5 289 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 CCL16O15467 120 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 C8AP07357 584 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 SCML4Q8N228 414 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 NETO2Q8NC67 525 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 CALN1Q9BXU9 219 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 EMILIN2Q9BXX0 1053 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 HCFC1R1Q9NWW0 138 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 CWC15Q9P013 229 aaKnown RBP18.81■□□□□ 0.6
ATG4B-217ENST00000475693 MSRAQ9UJ68 235 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 ADAM21Q9UKJ8 722 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 STAP1Q9ULZ2 295 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 CTAGE15A4D2H0 777 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 RTN3O95197 1032 aaPredicted RBP18.81■□□□□ 0.6
ATG4B-217ENST00000475693 RB1P06400 928 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 HMBSP08397 361 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 CTAGE8P0CG41 777 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 GJA1P17302 382 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 KDELR1P24390 212 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 PAFAH1B1P43034 410 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 CDH6P55285 790 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 DYNLT1P63172 113 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 ACAP1Q15027 740 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 TAF12Q16514 161 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 SEL1L2Q5TEA6 688 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 CTAGE6Q86UF2 777 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 CTAGE4Q8IX94 777 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 TDHQ8IZJ6 230 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 ACTRT1Q8TDG2 376 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 HAUS1Q96CS2 278 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 DHX35Q9H5Z1 703 aaKnown RBP18.81■□□□□ 0.6
ATG4B-217ENST00000475693 XPO7Q9UIA9 1087 aaKnown RBP18.81■□□□□ 0.6
ATG4B-217ENST00000475693 SSX2IPQ9Y2D8 614 aa18.81■□□□□ 0.6
ATG4B-217ENST00000475693 R3HDM2Q9Y2K5 976 aaKnown RBP18.81■□□□□ 0.6
ATG4B-217ENST00000475693 TRIOBPQ9H2D6 2365 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 FAM72CH0Y354 149 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 PGRMC1O00264 195 aaKnown RBP18.8■□□□□ 0.6
ATG4B-217ENST00000475693 GLUD1P00367 558 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 RDXP35241 583 aaKnown RBP18.8■□□□□ 0.6
ATG4B-217ENST00000475693 FAM72AQ5TYM5 149 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 FAM72DQ6L9T8 149 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 SPOCD1Q6ZMY3 1216 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 STRADAQ7RTN6 431 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 TMEM150AQ86TG1 271 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 FAM72BQ86X60 149 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 SLC13A5Q86YT5 568 aaPredicted RBP18.8■□□□□ 0.6
ATG4B-217ENST00000475693 KLHL7Q8IXQ5 586 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.8■□□□□ 0.6
ATG4B-217ENST00000475693 FBXW11Q9UKB1 542 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 C2orf78A6NCI8 922 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 KRIT1O00522 736 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 CLASP2O75122 1294 aaKnown RBP18.8■□□□□ 0.6
ATG4B-217ENST00000475693 ENDOD1O94919 500 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 C10orf120Q5SQS8 335 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 ERMARDQ5T6L9 678 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 LRRC38Q5VT99 294 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 B4GALNT4Q76KP1 1039 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 CMASQ8NFW8 434 aaPredicted RBP18.8■□□□□ 0.6
ATG4B-217ENST00000475693 EXD1Q8NHP7 514 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 RNF139Q8WU17 664 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 LRRN4Q8WUT4 740 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 ATG4AQ8WYN0 398 aa18.8■□□□□ 0.6
ATG4B-217ENST00000475693 CYP2S1Q96SQ9 504 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms