RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 CHURC1-FNTBB4DL54 471 aa16.41■□□□□ 0.22
CPSF3-203ENST00000475482 COCHO43405 550 aa16.41■□□□□ 0.22
CPSF3-203ENST00000475482 LCA5LO95447 670 aa16.41■□□□□ 0.22
CPSF3-203ENST00000475482 FAM200BP0CF97 657 aa16.41■□□□□ 0.22
CPSF3-203ENST00000475482 DRD1P21728 446 aa16.41■□□□□ 0.22
CPSF3-203ENST00000475482 PGFP49763 221 aa16.41■□□□□ 0.22
CPSF3-203ENST00000475482 MAP3K7CLP57077 242 aa16.41■□□□□ 0.22
CPSF3-203ENST00000475482 GRSF1Q12849 480 aaKnown RBP eCLIP16.41■□□□□ 0.22
CPSF3-203ENST00000475482 SLC18A3Q16572 532 aa16.41■□□□□ 0.22
CPSF3-203ENST00000475482 HECTD3Q5T447 861 aa16.41■□□□□ 0.22
CPSF3-203ENST00000475482 NAIF1Q69YI7 327 aaPredicted RBP16.41■□□□□ 0.22
CPSF3-203ENST00000475482 GPRIN1Q7Z2K8 1008 aa16.41■□□□□ 0.22
CPSF3-203ENST00000475482 KIAA1328Q86T90 577 aa16.41■□□□□ 0.22
CPSF3-203ENST00000475482 EZH1Q92800 747 aaPredicted RBP16.41■□□□□ 0.22
CPSF3-203ENST00000475482 KREMEN1Q96MU8 473 aa16.41■□□□□ 0.22
CPSF3-203ENST00000475482 P2RY13Q9BPV8 354 aa16.41■□□□□ 0.22
CPSF3-203ENST00000475482 TSGA10Q9BZW7 698 aa16.41■□□□□ 0.22
CPSF3-203ENST00000475482 DNAI2Q9GZS0 605 aa16.41■□□□□ 0.22
CPSF3-203ENST00000475482 FBXO44Q9H4M3 255 aa16.41■□□□□ 0.22
CPSF3-203ENST00000475482 GMIPQ9P107 970 aa16.41■□□□□ 0.22
CPSF3-203ENST00000475482 MYO18AQ92614 2054 aaKnown RBP16.41■□□□□ 0.22
CPSF3-203ENST00000475482 SPAG17Q6Q759 2223 aa16.41■□□□□ 0.22
CPSF3-203ENST00000475482 NFATC1O95644 943 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 ABL1P00519 1130 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 EGFP01133 1207 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 KRT5P13647 590 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 CD58P19256 250 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 ADORA2BP29275 332 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 RAD23BP54727 409 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 PTK2Q05397 1052 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 IFRD2Q12894 506 aaPredicted RBP16.4■□□□□ 0.22
CPSF3-203ENST00000475482 NR1H3Q13133 447 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 FBXO43Q4G163 708 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 PPP1R26Q5T8A7 1209 aaPredicted RBP16.4■□□□□ 0.22
CPSF3-203ENST00000475482 PKN3Q6P5Z2 889 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 DDX42Q86XP3 938 aaKnown RBP eCLIP16.4■□□□□ 0.22
CPSF3-203ENST00000475482 SLC4A11Q8NBS3 891 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 PPP1R13BQ96KQ4 1090 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 ARID3AQ99856 593 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 DESI2Q9BSY9 194 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 CCSER2Q9H7U1 834 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 CYLDQ9NQC7 956 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 CISHQ9NSE2 258 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 SMPD4Q9NXE4 827 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 TRMT1Q9NXH9 659 aaKnown RBP16.4■□□□□ 0.22
CPSF3-203ENST00000475482 SCML2Q9UQR0 700 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 USP3Q9Y6I4 520 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 DCHS1Q96JQ0 3298 aa16.4■□□□□ 0.22
CPSF3-203ENST00000475482 EML5Q05BV3 1969 aa16.39■□□□□ 0.21
CPSF3-203ENST00000475482 E2F8A0AVK6 867 aa16.39■□□□□ 0.21
CPSF3-203ENST00000475482 SLC9A3R1O14745 358 aaPredicted RBP16.39■□□□□ 0.21
CPSF3-203ENST00000475482 KRT86O43790 486 aa16.39■□□□□ 0.21
CPSF3-203ENST00000475482 PLEKP08567 350 aaPredicted RBP16.39■□□□□ 0.21
CPSF3-203ENST00000475482 MBL2P11226 248 aaPredicted RBP16.39■□□□□ 0.21
CPSF3-203ENST00000475482 TNFAIP3P21580 790 aa16.39■□□□□ 0.21
CPSF3-203ENST00000475482 OPRD1P41143 372 aa16.39■□□□□ 0.21
CPSF3-203ENST00000475482 ASTE1Q2TB18 679 aaPredicted RBP16.39■□□□□ 0.21
CPSF3-203ENST00000475482 ARHGAP17Q68EM7 881 aa16.39■□□□□ 0.21
CPSF3-203ENST00000475482 ZNF662Q6ZS27 426 aa16.39■□□□□ 0.21
CPSF3-203ENST00000475482 ZNF677Q86XU0 584 aa16.39■□□□□ 0.21
CPSF3-203ENST00000475482 ZNF276Q8N554 614 aa16.39■□□□□ 0.21
CPSF3-203ENST00000475482 UBR7Q8N806 425 aa16.39■□□□□ 0.21
CPSF3-203ENST00000475482 RUBCNQ92622 972 aa16.39■□□□□ 0.21
CPSF3-203ENST00000475482 CD101Q93033 1021 aa16.39■□□□□ 0.21
CPSF3-203ENST00000475482 EXOC4Q96A65 974 aa16.39■□□□□ 0.21
CPSF3-203ENST00000475482 DUSP16Q9BY84 665 aa16.39■□□□□ 0.21
CPSF3-203ENST00000475482 CFAP97Q9P2B7 532 aa16.39■□□□□ 0.21
CPSF3-203ENST00000475482 PCDHB4Q9Y5E5 795 aa16.39■□□□□ 0.21
CPSF3-203ENST00000475482 GREM1O60565 184 aa16.38■□□□□ 0.21
CPSF3-203ENST00000475482 CYP17A1P05093 508 aa16.38■□□□□ 0.21
CPSF3-203ENST00000475482 VAV2P52735 878 aa16.38■□□□□ 0.21
CPSF3-203ENST00000475482 DMWDQ09019 674 aa16.38■□□□□ 0.21
CPSF3-203ENST00000475482 KIF5AQ12840 1032 aa16.38■□□□□ 0.21
CPSF3-203ENST00000475482 DHCR24Q15392 516 aa16.38■□□□□ 0.21
CPSF3-203ENST00000475482 PPP1R2P3Q6NXS1 205 aa16.38■□□□□ 0.21
CPSF3-203ENST00000475482 KLHDC10Q6PID8 442 aa16.38■□□□□ 0.21
CPSF3-203ENST00000475482 RHBDF2Q6PJF5 856 aa16.38■□□□□ 0.21
CPSF3-203ENST00000475482 ZNF571Q7Z3V5 609 aaPredicted RBP16.38■□□□□ 0.21
CPSF3-203ENST00000475482 C17orf53Q8N3J3 647 aaPredicted RBP16.38■□□□□ 0.21
CPSF3-203ENST00000475482 KAT5Q92993 513 aa16.38■□□□□ 0.21
CPSF3-203ENST00000475482 OTUB2Q96DC9 234 aa16.38■□□□□ 0.21
CPSF3-203ENST00000475482 TMEM176AQ96HP8 235 aa16.38■□□□□ 0.21
CPSF3-203ENST00000475482 AGPAT1Q99943 283 aa16.38■□□□□ 0.21
CPSF3-203ENST00000475482 UBXN6Q9BZV1 441 aa16.38■□□□□ 0.21
CPSF3-203ENST00000475482 TLR8Q9NR97 1041 aaKnown RBP16.38■□□□□ 0.21
CPSF3-203ENST00000475482 OSER1Q9NX31 292 aa16.38■□□□□ 0.21
CPSF3-203ENST00000475482 TBC1D14Q9P2M4 693 aa16.38■□□□□ 0.21
CPSF3-203ENST00000475482 ADAMTS1Q9UHI8 967 aa16.38■□□□□ 0.21
CPSF3-203ENST00000475482 CNTN6Q9UQ52 1028 aa16.38■□□□□ 0.21
CPSF3-203ENST00000475482 SDK1Q7Z5N4 2213 aa16.38■□□□□ 0.21
CPSF3-203ENST00000475482 DMXL1Q9Y485 3027 aa16.37■□□□□ 0.21
CPSF3-203ENST00000475482 A0A0A0MRY4 1105 aa16.37■□□□□ 0.21
CPSF3-203ENST00000475482 CCDC163A0A0D9SF12 145 aa16.37■□□□□ 0.21
CPSF3-203ENST00000475482 CYP26A1O43174 497 aa16.37■□□□□ 0.21
CPSF3-203ENST00000475482 TLR5O60602 858 aa16.37■□□□□ 0.21
CPSF3-203ENST00000475482 ATG13O75143 517 aa16.37■□□□□ 0.21
CPSF3-203ENST00000475482 RNF40O75150 1001 aa16.37■□□□□ 0.21
CPSF3-203ENST00000475482 CHRM1P11229 460 aaPredicted RBP16.37■□□□□ 0.21
CPSF3-203ENST00000475482 HOXC13P31276 330 aa16.37■□□□□ 0.21
CPSF3-203ENST00000475482 CNR2P34972 360 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms