RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 CC2D1BQ5T0F9 858 aaKnown RBP6.49□□□□□ -1.37
TM9SF3-204ENST00000475401 GRHL2Q6ISB3 625 aa6.49□□□□□ -1.37
TM9SF3-204ENST00000475401 CCDC144NLQ6NUI1 221 aa6.49□□□□□ -1.37
TM9SF3-204ENST00000475401 DCDC5Q6ZRR9 648 aa6.49□□□□□ -1.37
TM9SF3-204ENST00000475401 SEMA6DQ8NFY4 1073 aa6.49□□□□□ -1.37
TM9SF3-204ENST00000475401 ASB2Q96Q27 587 aa6.49□□□□□ -1.37
TM9SF3-204ENST00000475401 EPS8L2Q9H6S3 715 aa6.49□□□□□ -1.37
TM9SF3-204ENST00000475401 COL11A2P13942 1736 aaPredicted RBP6.49□□□□□ -1.37
TM9SF3-204ENST00000475401 MANSC4A6NHS7 340 aaPredicted RBP6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 LINC01548A6NM66 108 aa6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 TTC34A8MYJ7 566 aa6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 TMEM232C9JQI7 657 aa6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 APEHP13798 732 aaKnown RBP6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 POLE2P56282 527 aa6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 GPC5P78333 572 aa6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 DNASE1L3Q13609 305 aa6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 BLMHQ13867 455 aa6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 MFSD13AQ14CX5 517 aa6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 PDCD2Q16342 344 aaPredicted RBP6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 PFKFB4Q16877 469 aa6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 PROSER3Q2NL68 480 aa6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 TRIM71Q2Q1W2 868 aaKnown RBP6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 ZACNQ401N2 412 aa6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 SYCE2Q6PIF2 218 aa6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 CLASRPQ8N2M8 674 aaKnown RBP6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 FAM71BQ8TC56 605 aa6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 HIC2Q96JB3 615 aa6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 ADGRE3Q9BY15 652 aa6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 OBP2BQ9NPH6 170 aa6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 FBXO28Q9NVF7 368 aa6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 NFU1Q9UMS0 254 aa6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 AOX1Q06278 1338 aa6.48□□□□□ -1.37
TM9SF3-204ENST00000475401 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.47□□□□□ -1.37
TM9SF3-204ENST00000475401 CBFA2T3O75081 653 aa6.47□□□□□ -1.37
TM9SF3-204ENST00000475401 MATN1P21941 496 aa6.47□□□□□ -1.37
TM9SF3-204ENST00000475401 IGHMBP2P38935 993 aaKnown RBP6.47□□□□□ -1.37
TM9SF3-204ENST00000475401 JAK3P52333 1124 aa6.47□□□□□ -1.37
TM9SF3-204ENST00000475401 FHL3Q13643 280 aa6.47□□□□□ -1.37
TM9SF3-204ENST00000475401 TRIM14Q14142 442 aa6.47□□□□□ -1.37
TM9SF3-204ENST00000475401 LARS2Q15031 903 aaKnown RBP6.47□□□□□ -1.37
TM9SF3-204ENST00000475401 C10orf62Q5T681 223 aaPredicted RBP6.47□□□□□ -1.37
TM9SF3-204ENST00000475401 RINT1Q6NUQ1 792 aa6.47□□□□□ -1.37
TM9SF3-204ENST00000475401 CHSY1Q86X52 802 aa6.47□□□□□ -1.37
TM9SF3-204ENST00000475401 LINC01465Q8N7H1 131 aa6.47□□□□□ -1.37
TM9SF3-204ENST00000475401 EDC3Q96F86 508 aaKnown RBP6.47□□□□□ -1.37
TM9SF3-204ENST00000475401 RXFP3Q9NSD7 469 aa6.47□□□□□ -1.37
TM9SF3-204ENST00000475401 LRFN1Q9P244 771 aa6.47□□□□□ -1.37
TM9SF3-204ENST00000475401 IGSF9Q9P2J2 1179 aa6.47□□□□□ -1.37
TM9SF3-204ENST00000475401 UBE2J1Q9Y385 318 aaPredicted RBP6.47□□□□□ -1.37
TM9SF3-204ENST00000475401 hCG_1642624A0A1W2PR95 340 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 AQP12BA6NM10 295 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 PRRT4C9JH25 899 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 CLIC1O00299 241 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 FYB1O15117 783 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 ASNA1O43681 348 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 ANXA6P08133 673 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 ITGA2BP08514 1039 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 AKT1P31749 480 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 GALNSP34059 522 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 PTK2BQ14289 1009 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 PFKFB3Q16875 520 aaPredicted RBP6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 CCDC38Q502W7 563 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 ATPAF1Q5TC12 328 aaPredicted RBP6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 KIAA1614Q5VZ46 1190 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 FAM90A2PQ658T7 463 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 DPY19L2P1Q6NXN4 242 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 ATG16L2Q8NAA4 619 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 ZNF764Q96H86 408 aaPredicted RBP6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 FAR2Q96K12 515 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 SAP30LQ9HAJ7 183 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 VPS45Q9NRW7 570 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 GAR1Q9NY12 217 aaKnown RBP6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 ASIC5Q9NY37 505 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 FZD4Q9ULV1 537 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 VPS4AQ9UN37 437 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 PCDHB2Q9Y5E7 798 aa6.46□□□□□ -1.38
TM9SF3-204ENST00000475401 TCRBV5S1A1TA0A578 114 aa6.45□□□□□ -1.38
TM9SF3-204ENST00000475401 LGALS16A8MUM7 142 aa6.45□□□□□ -1.38
TM9SF3-204ENST00000475401 H3BNC9 293 aa6.45□□□□□ -1.38
TM9SF3-204ENST00000475401 PCDH17O14917 1159 aa6.45□□□□□ -1.38
TM9SF3-204ENST00000475401 NPC1O15118 1278 aa6.45□□□□□ -1.38
TM9SF3-204ENST00000475401 PRAMEF2O60811 474 aa6.45□□□□□ -1.38
TM9SF3-204ENST00000475401 CSTBP04080 98 aaKnown RBP6.45□□□□□ -1.38
TM9SF3-204ENST00000475401 CERS1P27544 350 aa6.45□□□□□ -1.38
TM9SF3-204ENST00000475401 DUSP1P28562 367 aa6.45□□□□□ -1.38
TM9SF3-204ENST00000475401 WDR5P61964 334 aaKnown RBP6.45□□□□□ -1.38
TM9SF3-204ENST00000475401 KRT72Q14CN4 511 aa6.45□□□□□ -1.38
TM9SF3-204ENST00000475401 CNGA3Q16281 694 aa6.45□□□□□ -1.38
TM9SF3-204ENST00000475401 PIK3AP1Q6ZUJ8 805 aa6.45□□□□□ -1.38
TM9SF3-204ENST00000475401 RITA1Q96K30 269 aa6.45□□□□□ -1.38
TM9SF3-204ENST00000475401 RMDN3Q96TC7 470 aa6.45□□□□□ -1.38
TM9SF3-204ENST00000475401 TP63Q9H3D4 680 aaPredicted RBP6.45□□□□□ -1.38
TM9SF3-204ENST00000475401 DACT1Q9NYF0 836 aa6.45□□□□□ -1.38
TM9SF3-204ENST00000475401 TISP43B9A030 160 aa6.44□□□□□ -1.38
TM9SF3-204ENST00000475401 SYT5O00445 386 aa6.44□□□□□ -1.38
TM9SF3-204ENST00000475401 FCHO1O14526 889 aa6.44□□□□□ -1.38
TM9SF3-204ENST00000475401 CTIFO43310 598 aaKnown RBP6.44□□□□□ -1.38
TM9SF3-204ENST00000475401 ITGA5P08648 1049 aa6.44□□□□□ -1.38
TM9SF3-204ENST00000475401 PDIA3P30101 505 aaKnown RBP6.44□□□□□ -1.38
TM9SF3-204ENST00000475401 PROK1P58294 105 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms