RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 IKZF4Q9H2S9 585 aa14.9□□□□□ -0.02
ATG9A-220ENST00000475339 SLC39A2Q9NP94 309 aa14.9□□□□□ -0.02
ATG9A-220ENST00000475339 ITM2CQ9NQX7 267 aa14.9□□□□□ -0.02
ATG9A-220ENST00000475339 DDX43Q9NXZ2 648 aaKnown RBP14.9□□□□□ -0.02
ATG9A-220ENST00000475339 USP36Q9P275 1121 aaKnown RBP14.9□□□□□ -0.02
ATG9A-220ENST00000475339 TBC1D14Q9P2M4 693 aa14.9□□□□□ -0.02
ATG9A-220ENST00000475339 CPSF3Q9UKF6 684 aaKnown RBP14.9□□□□□ -0.02
ATG9A-220ENST00000475339 ANKRD6Q9Y2G4 727 aa14.9□□□□□ -0.02
ATG9A-220ENST00000475339 STYXL1Q9Y6J8 313 aa14.9□□□□□ -0.02
ATG9A-220ENST00000475339 TMEM131Q92545 1883 aa14.9□□□□□ -0.02
ATG9A-220ENST00000475339 LRRK2Q5S007 2527 aa14.9□□□□□ -0.02
ATG9A-220ENST00000475339 PRRT4C9JH25 899 aa14.89□□□□□ -0.03
ATG9A-220ENST00000475339 OLFM2O95897 454 aa14.89□□□□□ -0.03
ATG9A-220ENST00000475339 LDHAP00338 332 aaKnown RBP14.89□□□□□ -0.03
ATG9A-220ENST00000475339 RPN1P04843 607 aaKnown RBP14.89□□□□□ -0.03
ATG9A-220ENST00000475339 GARTP22102 1010 aa14.89□□□□□ -0.03
ATG9A-220ENST00000475339 TPMTP51580 245 aa14.89□□□□□ -0.03
ATG9A-220ENST00000475339 UCNP55089 124 aa14.89□□□□□ -0.03
ATG9A-220ENST00000475339 KMT5BQ4FZB7 885 aa14.89□□□□□ -0.03
ATG9A-220ENST00000475339 CFAP221Q4G0U5 840 aa14.89□□□□□ -0.03
ATG9A-220ENST00000475339 FBXL19Q6PCT2 694 aa14.89□□□□□ -0.03
ATG9A-220ENST00000475339 HS2ST1Q7LGA3 356 aa14.89□□□□□ -0.03
ATG9A-220ENST00000475339 TMEM25Q86YD3 366 aa14.89□□□□□ -0.03
ATG9A-220ENST00000475339 SPATA2LQ8IUW3 424 aaPredicted RBP14.89□□□□□ -0.03
ATG9A-220ENST00000475339 NELFCDQ8IXH7 590 aa14.89□□□□□ -0.03
ATG9A-220ENST00000475339 PDCL2Q8N4E4 241 aa14.89□□□□□ -0.03
ATG9A-220ENST00000475339 SNX19Q92543 992 aa14.89□□□□□ -0.03
ATG9A-220ENST00000475339 IGSF8Q969P0 613 aa14.89□□□□□ -0.03
ATG9A-220ENST00000475339 FAM213AQ9BRX8 229 aa14.89□□□□□ -0.03
ATG9A-220ENST00000475339 MKRN2Q9H000 416 aaKnown RBP14.89□□□□□ -0.03
ATG9A-220ENST00000475339 HOOK1Q9UJC3 728 aaKnown RBP14.89□□□□□ -0.03
ATG9A-220ENST00000475339 TCHHQ07283 1943 aa14.88□□□□□ -0.03
ATG9A-220ENST00000475339 KIAA0391O15091 583 aaKnown RBP14.88□□□□□ -0.03
ATG9A-220ENST00000475339 HCRTO43612 131 aa14.88□□□□□ -0.03
ATG9A-220ENST00000475339 C1SP09871 688 aa14.88□□□□□ -0.03
ATG9A-220ENST00000475339 PRR29P0C7W0 189 aa14.88□□□□□ -0.03
ATG9A-220ENST00000475339 MBL2P11226 248 aaPredicted RBP14.88□□□□□ -0.03
ATG9A-220ENST00000475339 CDK4P11802 303 aa14.88□□□□□ -0.03
ATG9A-220ENST00000475339 EHHADHQ08426 723 aa14.88□□□□□ -0.03
ATG9A-220ENST00000475339 INAVAQ3KP66 663 aa14.88□□□□□ -0.03
ATG9A-220ENST00000475339 FUT11Q495W5 492 aa14.88□□□□□ -0.03
ATG9A-220ENST00000475339 KCNT1Q5JUK3 1230 aa14.88□□□□□ -0.03
ATG9A-220ENST00000475339 GRAMD4Q6IC98 578 aa14.88□□□□□ -0.03
ATG9A-220ENST00000475339 EPM2AIP1Q7L775 607 aaPredicted RBP14.88□□□□□ -0.03
ATG9A-220ENST00000475339 GATAD2AQ86YP4 633 aa14.88□□□□□ -0.03
ATG9A-220ENST00000475339 SCFD1Q8WVM8 642 aa14.88□□□□□ -0.03
ATG9A-220ENST00000475339 SAAL1Q96ER3 474 aa14.88□□□□□ -0.03
ATG9A-220ENST00000475339 CNDP2Q96KP4 475 aaKnown RBP14.88□□□□□ -0.03
ATG9A-220ENST00000475339 CBWD1Q9BRT8 395 aa14.88□□□□□ -0.03
ATG9A-220ENST00000475339 PCIF1Q9H4Z3 704 aa14.88□□□□□ -0.03
ATG9A-220ENST00000475339 DNAJC17Q9NVM6 304 aaKnown RBP14.88□□□□□ -0.03
ATG9A-220ENST00000475339 DPP3Q9NY33 737 aa14.88□□□□□ -0.03
ATG9A-220ENST00000475339 HEMK1Q9Y5R4 338 aaPredicted RBP14.88□□□□□ -0.03
ATG9A-220ENST00000475339 FLNCQ14315 2725 aa14.88□□□□□ -0.03
ATG9A-220ENST00000475339 ANKRD17O75179 2603 aaKnown RBP14.88□□□□□ -0.03
ATG9A-220ENST00000475339 NBPF19A0A087WUL8 3843 aa14.88□□□□□ -0.03
ATG9A-220ENST00000475339 TERTO14746 1132 aaKnown RBP14.87□□□□□ -0.03
ATG9A-220ENST00000475339 KLRC4O43908 158 aa14.87□□□□□ -0.03
ATG9A-220ENST00000475339 KIF20AO95235 890 aa14.87□□□□□ -0.03
ATG9A-220ENST00000475339 IL18RAPO95256 599 aa14.87□□□□□ -0.03
ATG9A-220ENST00000475339 LDOC1O95751 146 aaPredicted RBP14.87□□□□□ -0.03
ATG9A-220ENST00000475339 OAS1P00973 400 aaKnown RBP14.87□□□□□ -0.03
ATG9A-220ENST00000475339 GP1BBP13224 206 aa14.87□□□□□ -0.03
ATG9A-220ENST00000475339 OXTRP30559 389 aa14.87□□□□□ -0.03
ATG9A-220ENST00000475339 ACADVLP49748 655 aa14.87□□□□□ -0.03
ATG9A-220ENST00000475339 NFATC3Q12968 1075 aa14.87□□□□□ -0.03
ATG9A-220ENST00000475339 TEAD4Q15561 434 aa14.87□□□□□ -0.03
ATG9A-220ENST00000475339 SV2CQ496J9 727 aa14.87□□□□□ -0.03
ATG9A-220ENST00000475339 DENND5BQ6ZUT9 1274 aa14.87□□□□□ -0.03
ATG9A-220ENST00000475339 BBS7Q8IWZ6 715 aa14.87□□□□□ -0.03
ATG9A-220ENST00000475339 FMR1NBQ8N0W7 255 aaPredicted RBP14.87□□□□□ -0.03
ATG9A-220ENST00000475339 ZNF507Q8TCN5 953 aa14.87□□□□□ -0.03
ATG9A-220ENST00000475339 FAM117AQ9C073 453 aa14.87□□□□□ -0.03
ATG9A-220ENST00000475339 SPHK2Q9NRA0 654 aa14.87□□□□□ -0.03
ATG9A-220ENST00000475339 RBAKQ9NYW8 714 aaPredicted RBP14.87□□□□□ -0.03
ATG9A-220ENST00000475339 DERAQ9Y315 318 aa14.87□□□□□ -0.03
ATG9A-220ENST00000475339 NUMA1Q14980 2115 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 GOLGA8IPA6NC78 632 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 GOLGA8JA6NMD2 632 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 SMC2O95347 1197 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 PCBP4P57723 403 aaKnown RBP14.86□□□□□ -0.03
ATG9A-220ENST00000475339 POU5F1Q01860 360 aaKnown RBP14.86□□□□□ -0.03
ATG9A-220ENST00000475339 VAC14Q08AM6 782 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 DPYDQ12882 1025 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 STK4Q13043 487 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 KNOP1Q1ED39 458 aaKnown RBP14.86□□□□□ -0.03
ATG9A-220ENST00000475339 BMT2Q1RMZ1 405 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 PRAMEF14Q5SWL7 426 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 KIAA1614Q5VZ46 1190 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 ZNF574Q6ZN55 896 aaPredicted RBP14.86□□□□□ -0.03
ATG9A-220ENST00000475339 OSTM1Q86WC4 334 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 DDX42Q86XP3 938 aaKnown RBP eCLIP14.86□□□□□ -0.03
ATG9A-220ENST00000475339 TMPRSS6Q8IU80 811 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 GPD1LQ8N335 351 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 GOLGA5Q8TBA6 731 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 TSC1Q92574 1164 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 OTUB2Q96DC9 234 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 FUBP3Q96I24 572 aaKnown RBP eCLIP14.86□□□□□ -0.03
ATG9A-220ENST00000475339 HIC2Q96JB3 615 aa14.86□□□□□ -0.03
ATG9A-220ENST00000475339 SPATA17Q96L03 361 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms