RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 NCOA4Q13772 614 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 SLC39A14Q15043 492 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 BMT2Q1RMZ1 405 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 HLA-BQ31612 363 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 ACOT1Q86TX2 421 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 UNC93AQ86WB7 457 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 TMPRSS6Q8IU80 811 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 ZMIZ2Q8NF64 920 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 GOLGA5Q8TBA6 731 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 BAHD1Q8TBE0 780 aaPredicted RBP13.27□□□□□ -0.29
SKA3-206ENST00000475251 SLC2A14Q8TDB8 520 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 RHBDD1Q8TEB9 315 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 ZNF516Q92618 1163 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 SMOQ99835 787 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 PNPLA8Q9NP80 782 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 CD93Q9NPY3 652 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 THAP10Q9P2Z0 257 aaPredicted RBP13.27□□□□□ -0.29
SKA3-206ENST00000475251 FBXO10Q9UK96 956 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 ANKRD11Q6UB99 2663 aaPredicted RBP13.27□□□□□ -0.29
SKA3-206ENST00000475251 WASH3PC4AMC7 463 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 STX6O43752 255 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 TBX18O95935 607 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 IGLV3-19P01714 112 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 CYBBP04839 570 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 RPN1P04843 607 aaKnown RBP13.26□□□□□ -0.29
SKA3-206ENST00000475251 RALAP11233 206 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 RARGP13631 454 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 CCDC130P13994 396 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 ACO1P21399 889 aaKnown RBP13.26□□□□□ -0.29
SKA3-206ENST00000475251 AFF3P51826 1226 aaKnown RBP13.26□□□□□ -0.29
SKA3-206ENST00000475251 ENPP2Q13822 863 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 GSE1Q14687 1217 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 EIF4HQ15056 248 aaKnown RBP13.26□□□□□ -0.29
SKA3-206ENST00000475251 TEAD4Q15561 434 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 SGSM1Q2NKQ1 1148 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 CNNM4Q6P4Q7 775 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 SCARA5Q6ZMJ2 495 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 Q6ZNB5 142 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 DBX2Q6ZNG2 339 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 ANKS1BQ7Z6G8 1248 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 SCUBE3Q8IX30 993 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 NELFCDQ8IXH7 590 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 CRYBG2Q8N1P7 616 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 IQUBQ8NA54 791 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 TAF4BQ92750 862 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 BHMTQ93088 406 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 LRIG1Q96JA1 1093 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 DCLK3Q9C098 648 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 MKRN2Q9H000 416 aaKnown RBP13.26□□□□□ -0.29
SKA3-206ENST00000475251 MAGEF1Q9HAY2 307 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 TFIP11Q9UBB9 837 aaKnown RBP13.26□□□□□ -0.29
SKA3-206ENST00000475251 PLXNB3Q9ULL4 1909 aa13.26□□□□□ -0.29
SKA3-206ENST00000475251 PTPRBP23467 1997 aa13.25□□□□□ -0.29
SKA3-206ENST00000475251 ITPR1Q14643 2758 aa13.25□□□□□ -0.29
SKA3-206ENST00000475251 E9PAM4 449 aa13.25□□□□□ -0.29
SKA3-206ENST00000475251 CYP26A1O43174 497 aa13.25□□□□□ -0.29
SKA3-206ENST00000475251 BEST1O76090 585 aa13.25□□□□□ -0.29
SKA3-206ENST00000475251 DKK1O94907 266 aa13.25□□□□□ -0.29
SKA3-206ENST00000475251 PENKP01210 267 aaPredicted RBP13.25□□□□□ -0.29
SKA3-206ENST00000475251 IL12RB1P42701 662 aa13.25□□□□□ -0.29
SKA3-206ENST00000475251 MFAP3P55082 362 aa13.25□□□□□ -0.29
SKA3-206ENST00000475251 CLDN10P78369 228 aa13.25□□□□□ -0.29
SKA3-206ENST00000475251 COG7P83436 770 aa13.25□□□□□ -0.29
SKA3-206ENST00000475251 ARID5AQ03989 594 aa13.25□□□□□ -0.29
SKA3-206ENST00000475251 INAVAQ3KP66 663 aa13.25□□□□□ -0.29
SKA3-206ENST00000475251 C10orf120Q5SQS8 335 aa13.25□□□□□ -0.29
SKA3-206ENST00000475251 UNC13DQ70J99 1090 aa13.25□□□□□ -0.29
SKA3-206ENST00000475251 ZNF276Q8N554 614 aa13.25□□□□□ -0.29
SKA3-206ENST00000475251 USP28Q96RU2 1077 aa13.25□□□□□ -0.29
SKA3-206ENST00000475251 ZSCAN16Q9H4T2 348 aaPredicted RBP13.25□□□□□ -0.29
SKA3-206ENST00000475251 IL21RQ9HBE5 538 aa13.25□□□□□ -0.29
SKA3-206ENST00000475251 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.25□□□□□ -0.29
SKA3-206ENST00000475251 PLK2Q9NYY3 685 aa13.25□□□□□ -0.29
SKA3-206ENST00000475251 EIF2B4Q9UI10 523 aaKnown RBP13.25□□□□□ -0.29
SKA3-206ENST00000475251 METRNQ9UJH8 293 aa13.25□□□□□ -0.29
SKA3-206ENST00000475251 FNDC3AQ9Y2H6 1198 aaKnown RBP13.25□□□□□ -0.29
SKA3-206ENST00000475251 MYH10P35580 1976 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 KCNJ18B7U540 433 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 TNFSF14O43557 240 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 TIMM44O43615 452 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 STC2O76061 302 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 ATXN1LP0C7T5 689 aaKnown RBP13.24□□□□□ -0.29
SKA3-206ENST00000475251 GRK6P43250 576 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 NDST1P52848 882 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 ORC1Q13415 861 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 STK38Q15208 465 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 E2F4Q16254 413 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 GEN1Q17RS7 908 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 KNOP1Q1ED39 458 aaKnown RBP13.24□□□□□ -0.29
SKA3-206ENST00000475251 FYB2Q5VWT5 728 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 FAM173BQ6P4H8 233 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 CLEC20AQ6ZU45 233 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 PDCD7Q8N8D1 485 aaKnown RBP13.24□□□□□ -0.29
SKA3-206ENST00000475251 PARD3BQ8TEW8 1205 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 SNX19Q92543 992 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 HNRNPABQ99729 332 aaKnown RBP13.24□□□□□ -0.29
SKA3-206ENST00000475251 C7orf25Q9BPX7 421 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 SLC2A11Q9BYW1 496 aa13.24□□□□□ -0.29
SKA3-206ENST00000475251 GZF1Q9H116 711 aaPredicted RBP13.24□□□□□ -0.29
SKA3-206ENST00000475251 SDCBP2Q9H190 292 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms