RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 REXO1L1PQ8IX06 675 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 CATSPER2Q96P56 530 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 MRGBPQ9NV56 204 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 RPS6KB2Q9UBS0 482 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 COPG1Q9Y678 874 aaKnown RBP11.27□□□□□ -0.61
VAPB-204ENST00000475243 DLGAP3O95886 979 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 F9P00740 461 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 THRAP10827 490 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 GHRP10912 638 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 GSSP48637 474 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 SCUBE1Q8IWY4 988 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 DAGLBQ8NCG7 672 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 CASP10Q92851 521 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 TPD52L3Q96J77 140 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 MAGEB18Q96M61 343 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 EMILIN2Q9BXX0 1053 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 TSPAN16Q9UKR8 245 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 DSEQ9UL01 958 aa11.27□□□□□ -0.61
VAPB-204ENST00000475243 DDNO94850 711 aaPredicted RBP11.26□□□□□ -0.61
VAPB-204ENST00000475243 CCDC130P13994 396 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 GARTP22102 1010 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 DEFA1P59665 94 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 DEFA3P59666 94 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 PTPN11Q06124 597 aaPredicted RBP11.26□□□□□ -0.61
VAPB-204ENST00000475243 PTPAQ15257 358 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 GRIK4Q16099 956 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 PDGFDQ9GZP0 370 aaPredicted RBP11.26□□□□□ -0.61
VAPB-204ENST00000475243 VHLP40337 213 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 RASA2Q15283 850 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 SV2AQ7L0J3 742 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 ENGASEQ8NFI3 743 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 GBA2Q9HCG7 927 aaPredicted RBP11.26□□□□□ -0.61
VAPB-204ENST00000475243 MPP6Q9NZW5 540 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 KIAA1257Q9ULG3 409 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 PDHXO00330 501 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 SLC2A4P14672 509 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 C16orf59Q7L2K0 433 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 WDR49Q8IV35 697 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 ACTR8Q9H981 624 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 MAP10Q9P2G4 905 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 CNTNAP4Q9C0A0 1308 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 LOC102724159A0A0B4J2E5 919 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 DYRK3O43781 588 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 SERPINB1P30740 379 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 PWP2Q15269 919 aaKnown RBP11.26□□□□□ -0.61
VAPB-204ENST00000475243 OVOS1Q6IE37 1185 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 TTI2Q6NXR4 508 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 ADGRA1Q86SQ6 560 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 ATG16L2Q8NAA4 619 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 LPCAT1Q8NF37 534 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 ZMYM5Q9UJ78 669 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 PXDNLA1KZ92 1463 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 TNNI3P19429 210 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 MSH3P20585 1137 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 CD302Q8IX05 232 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 NACC2Q96BF6 587 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 RTFDC1Q9BY42 306 aaPredicted RBP11.26□□□□□ -0.61
VAPB-204ENST00000475243 ELOVL6Q9H5J4 265 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 NOD2Q9HC29 1040 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 KRCC1Q9NPI7 259 aaPredicted RBP11.26□□□□□ -0.61
VAPB-204ENST00000475243 USP31Q70CQ4 1352 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 IFRD1O00458 451 aaPredicted RBP11.26□□□□□ -0.61
VAPB-204ENST00000475243 ITGALP20701 1170 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 USP39Q53GS9 565 aaKnown RBP11.26□□□□□ -0.61
VAPB-204ENST00000475243 PCSK9Q8NBP7 692 aaKnown RBP11.26□□□□□ -0.61
VAPB-204ENST00000475243 SEPHS2Q99611 448 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 RNPEPQ9H4A4 650 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 NUDT5Q9UKK9 219 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 IPPQ9Y573 584 aa11.26□□□□□ -0.61
VAPB-204ENST00000475243 PSMC3P17980 439 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 CCR1P32246 355 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 SARSP49591 514 aaKnown RBP11.25□□□□□ -0.61
VAPB-204ENST00000475243 PKN1Q16512 942 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 SHROOM1Q2M3G4 852 aaPredicted RBP11.25□□□□□ -0.61
VAPB-204ENST00000475243 PDPK2PQ6A1A2 396 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 FBXO25Q8TCJ0 367 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 TMEM120AQ9BXJ8 343 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 FRMD8Q9BZ67 464 aaPredicted RBP11.25□□□□□ -0.61
VAPB-204ENST00000475243 TMX2Q9Y320 296 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 BST2Q10589 180 aaKnown RBP11.25□□□□□ -0.61
VAPB-204ENST00000475243 BOP1Q14137 746 aaKnown RBP11.25□□□□□ -0.61
VAPB-204ENST00000475243 ACOX1Q15067 660 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 PGM5Q15124 567 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 Q4G0T1 1027 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 SYTL5Q8TDW5 730 aaPredicted RBP11.25□□□□□ -0.61
VAPB-204ENST00000475243 NDEL1Q9GZM8 345 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 SPATA31A6Q5VVP1 1343 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 FAM205AQ6ZU69 1335 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 ZC3H13Q5T200 1668 aaKnown RBP11.25□□□□□ -0.61
VAPB-204ENST00000475243 CPA3P15088 417 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 TUBP50607 506 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 EML3Q32P44 896 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 NECAB2Q7Z6G3 386 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 TMC2Q8TDI7 906 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 WDR27A2RRH5 827 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 KBTBD12Q3ZCT8 623 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 MARC1Q5VT66 337 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 FBXO10Q9UK96 956 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 USP17L7P0C7H9 530 aa11.25□□□□□ -0.61
VAPB-204ENST00000475243 RAG1P15918 1043 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms