RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 FAM124BQ9H5Z6 455 aaPredicted RBP16.45■□□□□ 0.22
SRRT-209ENST00000474896 EXOC1Q9NV70 894 aa16.45■□□□□ 0.22
SRRT-209ENST00000474896 DNAAF2Q9NVR5 837 aaKnown RBP16.45■□□□□ 0.22
SRRT-209ENST00000474896 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.45■□□□□ 0.22
SRRT-209ENST00000474896 ASPMQ8IZT6 3477 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 PCDH15Q96QU1 1955 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 GOLGA6L4A6NEF3 574 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 GFRA2O00451 464 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 PDXKO00764 312 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 IKBKBO14920 756 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 SH3BP5O60239 455 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 HLA-DRAP01903 254 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 NR3C1P04150 777 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 SLFN14P0C7P3 912 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 TRIM21P19474 475 aaKnown RBP16.44■□□□□ 0.22
SRRT-209ENST00000474896 CMA1P23946 247 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 PIK3CAP42336 1068 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 HNRNPDQ14103 355 aaKnown RBP16.44■□□□□ 0.22
SRRT-209ENST00000474896 KMT5BQ4FZB7 885 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 C1orf220Q5T0J3 134 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 CEP135Q66GS9 1140 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 KLHDC10Q6PID8 442 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 Q6ZNB5 142 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 FOXJ1Q92949 421 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 PAGE5Q96GU1 130 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 NT5C1AQ9BXI3 368 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 NAGPAQ9UK23 515 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 FBXO10Q9UK96 956 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 FRMD4BQ9Y2L6 1034 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 PCDHA5Q9Y5H7 936 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 AKAP13Q12802 2813 aa16.44■□□□□ 0.22
SRRT-209ENST00000474896 FAM221BA6H8Z2 402 aa16.43■□□□□ 0.22
SRRT-209ENST00000474896 STC2O76061 302 aa16.43■□□□□ 0.22
SRRT-209ENST00000474896 GNSP15586 552 aa16.43■□□□□ 0.22
SRRT-209ENST00000474896 KIF11P52732 1056 aa16.43■□□□□ 0.22
SRRT-209ENST00000474896 SLC14A1Q13336 389 aa16.43■□□□□ 0.22
SRRT-209ENST00000474896 TRIP6Q15654 476 aaKnown RBP16.43■□□□□ 0.22
SRRT-209ENST00000474896 WDR45BQ5MNZ6 344 aa16.43■□□□□ 0.22
SRRT-209ENST00000474896 SCD5Q86SK9 330 aa16.43■□□□□ 0.22
SRRT-209ENST00000474896 P2RY11Q96G91 374 aa16.43■□□□□ 0.22
SRRT-209ENST00000474896 SUSD2Q9UGT4 822 aa16.43■□□□□ 0.22
SRRT-209ENST00000474896 PCDHB9Q9Y5E1 797 aa16.43■□□□□ 0.22
SRRT-209ENST00000474896 STON1Q9Y6Q2 735 aa16.43■□□□□ 0.22
SRRT-209ENST00000474896 A0A1B0GVL5 298 aa16.42■□□□□ 0.22
SRRT-209ENST00000474896 GADD45BO75293 160 aaPredicted RBP16.42■□□□□ 0.22
SRRT-209ENST00000474896 GJB3O75712 270 aa16.42■□□□□ 0.22
SRRT-209ENST00000474896 KIF20AO95235 890 aa16.42■□□□□ 0.22
SRRT-209ENST00000474896 KLKB1P03952 638 aa16.42■□□□□ 0.22
SRRT-209ENST00000474896 RALAP11233 206 aa16.42■□□□□ 0.22
SRRT-209ENST00000474896 HOXB3P14651 431 aaPredicted RBP16.42■□□□□ 0.22
SRRT-209ENST00000474896 PFKFB1P16118 471 aa16.42■□□□□ 0.22
SRRT-209ENST00000474896 CD6P30203 668 aa16.42■□□□□ 0.22
SRRT-209ENST00000474896 VAMP7P51809 220 aa16.42■□□□□ 0.22
SRRT-209ENST00000474896 INCA1Q0VD86 236 aa16.42■□□□□ 0.22
SRRT-209ENST00000474896 ZNF423Q2M1K9 1284 aa16.42■□□□□ 0.22
SRRT-209ENST00000474896 FUT11Q495W5 492 aa16.42■□□□□ 0.22
SRRT-209ENST00000474896 LRSAM1Q6UWE0 723 aa16.42■□□□□ 0.22
SRRT-209ENST00000474896 TADA2BQ86TJ2 420 aa16.42■□□□□ 0.22
SRRT-209ENST00000474896 TOE1Q96GM8 510 aaKnown RBP16.42■□□□□ 0.22
SRRT-209ENST00000474896 PRDM16Q9HAZ2 1276 aa16.42■□□□□ 0.22
SRRT-209ENST00000474896 CYP3A43Q9HB55 503 aa16.42■□□□□ 0.22
SRRT-209ENST00000474896 APOBEC3GQ9HC16 384 aaKnown RBP16.42■□□□□ 0.22
SRRT-209ENST00000474896 PNPLA8Q9NP80 782 aa16.42■□□□□ 0.22
SRRT-209ENST00000474896 HPSEQ9Y251 543 aa16.42■□□□□ 0.22
SRRT-209ENST00000474896 ZNF510Q9Y2H8 683 aa16.42■□□□□ 0.22
SRRT-209ENST00000474896 FAM237AA0A1B0GTK4 181 aa16.41■□□□□ 0.22
SRRT-209ENST00000474896 ACTN4O43707 911 aaKnown RBP16.41■□□□□ 0.22
SRRT-209ENST00000474896 CALUO43852 315 aaPredicted RBP16.41■□□□□ 0.22
SRRT-209ENST00000474896 HMBSP08397 361 aa16.41■□□□□ 0.22
SRRT-209ENST00000474896 CD58P19256 250 aa16.41■□□□□ 0.22
SRRT-209ENST00000474896 GCLMP48507 274 aa16.41■□□□□ 0.22
SRRT-209ENST00000474896 PSEN1P49768 467 aa16.41■□□□□ 0.22
SRRT-209ENST00000474896 COG7P83436 770 aa16.41■□□□□ 0.22
SRRT-209ENST00000474896 RING1Q06587 406 aa16.41■□□□□ 0.22
SRRT-209ENST00000474896 COL9A2Q14055 689 aaPredicted RBP16.41■□□□□ 0.22
SRRT-209ENST00000474896 STARD3Q14849 445 aa16.41■□□□□ 0.22
SRRT-209ENST00000474896 CCDC186Q7Z3E2 898 aa16.41■□□□□ 0.22
SRRT-209ENST00000474896 RAB44Q7Z6P3 723 aaPredicted RBP16.41■□□□□ 0.22
SRRT-209ENST00000474896 METTL3Q86U44 580 aaKnown RBP16.41■□□□□ 0.22
SRRT-209ENST00000474896 ZNF276Q8N554 614 aa16.41■□□□□ 0.22
SRRT-209ENST00000474896 DUSP16Q9BY84 665 aa16.41■□□□□ 0.22
SRRT-209ENST00000474896 IMPG2Q9BZV3 1241 aa16.41■□□□□ 0.22
SRRT-209ENST00000474896 GOLPH3LQ9H4A5 285 aa16.41■□□□□ 0.22
SRRT-209ENST00000474896 ITM2CQ9NQX7 267 aa16.41■□□□□ 0.22
SRRT-209ENST00000474896 WSB2Q9NYS7 404 aaPredicted RBP16.41■□□□□ 0.22
SRRT-209ENST00000474896 THAP10Q9P2Z0 257 aaPredicted RBP16.41■□□□□ 0.22
SRRT-209ENST00000474896 SLC27A6Q9Y2P4 619 aa16.41■□□□□ 0.22
SRRT-209ENST00000474896 ZZEF1O43149 2961 aa16.4■□□□□ 0.22
SRRT-209ENST00000474896 TAF4O00268 1085 aa16.4■□□□□ 0.22
SRRT-209ENST00000474896 CILPO75339 1184 aa16.4■□□□□ 0.22
SRRT-209ENST00000474896 PENKP01210 267 aaPredicted RBP16.4■□□□□ 0.22
SRRT-209ENST00000474896 CHKAP35790 457 aa16.4■□□□□ 0.22
SRRT-209ENST00000474896 IL12RB1P42701 662 aa16.4■□□□□ 0.22
SRRT-209ENST00000474896 NDUFA8P51970 172 aa16.4■□□□□ 0.22
SRRT-209ENST00000474896 MFAP3P55082 362 aa16.4■□□□□ 0.22
SRRT-209ENST00000474896 EFEMP1Q12805 493 aa16.4■□□□□ 0.22
SRRT-209ENST00000474896 GEN1Q17RS7 908 aa16.4■□□□□ 0.22
SRRT-209ENST00000474896 PPP1R26Q5T8A7 1209 aaPredicted RBP16.4■□□□□ 0.22
SRRT-209ENST00000474896 FYB2Q5VWT5 728 aa16.4■□□□□ 0.22
SRRT-209ENST00000474896 TMPRSS6Q8IU80 811 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms