RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 MTMR10Q9NXD2 777 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 CLIC5Q9NZA1 410 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 RCOR3Q9P2K3 495 aaPredicted RBP6.9□□□□□ -1.3
ATG4A-207ENST00000474825 PCYOX1Q9UHG3 505 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 STAP1Q9ULZ2 295 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 USTQ9Y2C2 406 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 SSX2IPQ9Y2D8 614 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 PCDHB12Q9Y5F1 795 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 SLC4A7Q9Y6M7 1214 aa6.9□□□□□ -1.3
ATG4A-207ENST00000474825 CHD7Q9P2D1 2997 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 TCRBV7S2A1N4TA0A589 114 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 KRIT1O00522 736 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 AXIN1O15169 862 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 PRPSAP2O60256 369 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 PHF2O75151 1096 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 GRAP2O75791 330 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 FGF18O76093 207 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 TJP3O95049 919 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 PAPLNO95428 1278 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 RB1P06400 928 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 RALAP11233 206 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 CPB1P15086 417 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 ATP2A2P16615 1042 aaKnown RBP6.89□□□□□ -1.31
ATG4A-207ENST00000474825 DESP17661 470 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 ATF6P18850 670 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 TNFRSF8P28908 595 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 L1CAMP32004 1257 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 CHRNA3P32297 505 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 OR1D2P34982 312 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 RDXP35241 583 aaKnown RBP6.89□□□□□ -1.31
ATG4A-207ENST00000474825 BMPR1AP36894 532 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 PTGIRP43119 386 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 FNTAP49354 379 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 CXCR3P49682 368 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 DNA2P51530 1060 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 ZNF135P52742 658 aaPredicted RBP6.89□□□□□ -1.31
ATG4A-207ENST00000474825 RABGGTBP53611 331 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 DRG2P55039 364 aaKnown RBP6.89□□□□□ -1.31
ATG4A-207ENST00000474825 RNASE9P60153 205 aaKnown RBP6.89□□□□□ -1.31
ATG4A-207ENST00000474825 YWHAGP61981 247 aaKnown RBP eCLIP6.89□□□□□ -1.31
ATG4A-207ENST00000474825 PITX1P78337 314 aaPredicted RBP6.89□□□□□ -1.31
ATG4A-207ENST00000474825 KRT17Q04695 432 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 ADCY2Q08462 1091 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 C2orf54Q08AI8 447 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 DUSP4Q13115 394 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 SEMA3BQ13214 749 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 NNTQ13423 1086 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 ELF2Q15723 593 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 DDR2Q16832 855 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 LRIT3Q3SXY7 679 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 RAB6CQ53S08 254 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 DCAF6Q58WW2 860 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 ARTNQ5T4W7 220 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 ERMARDQ5T6L9 678 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 DENND5BQ6ZUT9 1274 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 BBS12Q6ZW61 710 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 RTL10Q7L3V2 364 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 MAATS1Q7Z4T9 603 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 TCEAL8Q8IYN2 117 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 TTC9BQ8N6N2 239 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 HNRNPLLQ8WVV9 542 aaKnown RBP6.89□□□□□ -1.31
ATG4A-207ENST00000474825 OVCA2Q8WZ82 227 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 NKD2Q969F2 451 aaPredicted RBP6.89□□□□□ -1.31
ATG4A-207ENST00000474825 TRMT2BQ96GJ1 504 aaKnown RBP6.89□□□□□ -1.31
ATG4A-207ENST00000474825 ZNF670Q9BS34 389 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 LRRC1Q9BTT6 524 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 SNRNP25Q9BV90 132 aaKnown RBP6.89□□□□□ -1.31
ATG4A-207ENST00000474825 PARD6BQ9BYG5 372 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 RAB6CQ9H0N0 254 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 MTIF3Q9H2K0 278 aaKnown RBP6.89□□□□□ -1.31
ATG4A-207ENST00000474825 NMUR1Q9HB89 426 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 PCDH18Q9HCL0 1135 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 NPDC1Q9NQX5 325 aaPredicted RBP6.89□□□□□ -1.31
ATG4A-207ENST00000474825 GDF3Q9NR23 364 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 MRPL17Q9NRX2 175 aaKnown RBP6.89□□□□□ -1.31
ATG4A-207ENST00000474825 ABI2Q9NYB9 513 aaPredicted RBP6.89□□□□□ -1.31
ATG4A-207ENST00000474825 FBXW11Q9UKB1 542 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 MTUS1Q9ULD2 1270 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 FZD10Q9ULW2 581 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 NAALADL1Q9UQQ1 740 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 NEU2Q9Y3R4 380 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 RWDD3Q9Y3V2 267 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 CDY1Q9Y6F8 540 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 PATJQ8NI35 1801 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 PTPRSQ13332 1948 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 CHD9Q3L8U1 2897 aa6.89□□□□□ -1.31
ATG4A-207ENST00000474825 GOLGA6L10A0A0M3HER8 536 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 LINC01553A4QN01 128 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 CCDC151A5D8V7 595 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 ZBBXA8MT70 800 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 I6L893 689 aaPredicted RBP6.88□□□□□ -1.31
ATG4A-207ENST00000474825 M0QYT0 321 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 TEX28O15482 410 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 IRAK2O43187 625 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 SEC24AO95486 1093 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 KRT1P04264 644 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 URODP06132 367 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 CD48P09326 243 aa6.88□□□□□ -1.31
ATG4A-207ENST00000474825 HMGA1P17096 107 aaKnown RBP6.88□□□□□ -1.31
ATG4A-207ENST00000474825 YWHAQP27348 245 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms