RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 CNGB3Q9NQW8 809 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 ST7Q9NRC1 585 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 ABHD10Q9NUJ1 306 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.33□□□□□ -1.24
LIMD1-204ENST00000474665 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.33□□□□□ -1.24
LIMD1-204ENST00000474665 TRPM5Q9NZQ8 1165 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 UXTQ9UBK9 157 aaPredicted RBP7.33□□□□□ -1.24
LIMD1-204ENST00000474665 NUDT5Q9UKK9 219 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 SIT1Q9Y3P8 196 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 AKR1B15C9JRZ8 316 aaPredicted RBP7.32□□□□□ -1.24
LIMD1-204ENST00000474665 ZNF263O14978 683 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 GJB6O95452 261 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 SPINK2P20155 84 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 WEE1P30291 646 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 GBP2P32456 591 aaPredicted RBP7.32□□□□□ -1.24
LIMD1-204ENST00000474665 TUBP50607 506 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 SLC8A3P57103 927 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 SLC7A9P82251 487 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 CDK17Q00537 523 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 MAPK8IP2Q13387 824 aaPredicted RBP7.32□□□□□ -1.24
LIMD1-204ENST00000474665 TRIM14Q14142 442 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 LPAL2Q16609 132 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 OTUD1Q5VV17 481 aaPredicted RBP7.32□□□□□ -1.24
LIMD1-204ENST00000474665 SYPL2Q5VXT5 272 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 BSPRYQ5W0U4 402 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 TRIM72Q6ZMU5 477 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 PHLDB2Q86SQ0 1253 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 PHF13Q86YI8 300 aaPredicted RBP7.32□□□□□ -1.24
LIMD1-204ENST00000474665 TMEM139Q8IV31 216 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 DRC7Q8IY82 874 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 SIX6OS1Q8N1H7 587 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 ZNF276Q8N554 614 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 SPC24Q8NBT2 197 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 IRGQQ8WZA9 623 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 EDEM1Q92611 657 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 SMARCD2Q92925 531 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 P2RY11Q96G91 374 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 SLITRK1Q96PX8 696 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 C11orf70Q9BRQ4 267 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 NUCKS1Q9H1E3 243 aaKnown RBP7.32□□□□□ -1.24
LIMD1-204ENST00000474665 EPC1Q9H2F5 836 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 GKN1Q9NS71 199 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 CLIC5Q9NZA1 410 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 CALCOCO1Q9P1Z2 691 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 WNT16Q9UBV4 365 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 ADAMTS1Q9UHI8 967 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 NAGPAQ9UK23 515 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 TMEM59LQ9UK28 342 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 GMEB2Q9UKD1 530 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 CEP295Q9C0D2 2601 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 COL4A2P08572 1712 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 COL4A3Q01955 1670 aa7.32□□□□□ -1.24
LIMD1-204ENST00000474665 TICRRQ7Z2Z1 1910 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 GOLGA6L3A6NEY3 463 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 TLR5O60602 858 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 GRAP2O75791 330 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 FBXO21O94952 628 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 FGF19O95750 216 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 ABL1P00519 1130 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 IGLV3-25P01717 112 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 LTFP02788 710 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 KLKB1P03952 638 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 CCDC172P0C7W6 258 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 GZMAP12544 262 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 RARGP13631 454 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 HDCP19113 662 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 TFE3P19532 575 aaPredicted RBP7.31□□□□□ -1.24
LIMD1-204ENST00000474665 TNFAIP3P21580 790 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 DDX6P26196 483 aaKnown RBP eCLIP7.31□□□□□ -1.24
LIMD1-204ENST00000474665 FLT3P36888 993 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 ACADSBP45954 432 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 PPP3CCP48454 512 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 YWHAGP61981 247 aaKnown RBP eCLIP7.31□□□□□ -1.24
LIMD1-204ENST00000474665 SLC6A3Q01959 620 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 GFPT1Q06210 699 aaPredicted RBP7.31□□□□□ -1.24
LIMD1-204ENST00000474665 EIF4EBP2Q13542 120 aaPredicted RBP7.31□□□□□ -1.24
LIMD1-204ENST00000474665 ZNF528Q3MIS6 628 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 RAB6CQ53S08 254 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 PPP1R15BQ5SWA1 713 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 HECTD3Q5T447 861 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 ACAD10Q6JQN1 1059 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 MSANTD2Q6P1R3 559 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 KLHDC10Q6PID8 442 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 VITQ6UXI7 678 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 SLC26A9Q7LBE3 791 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 ERICH1Q86X53 443 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 MCOLN2Q8IZK6 566 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 ZBTB44Q8NCP5 570 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 PDZD8Q8NEN9 1154 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 ZNF397Q8NF99 534 aaPredicted RBP7.31□□□□□ -1.24
LIMD1-204ENST00000474665 NUP205Q92621 2012 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 MRPS31Q92665 395 aaKnown RBP7.31□□□□□ -1.24
LIMD1-204ENST00000474665 C18orf8Q96DM3 657 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 SLC2A13Q96QE2 648 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 KXD1Q9BQD3 176 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 KLF16Q9BXK1 252 aaPredicted RBP7.31□□□□□ -1.24
LIMD1-204ENST00000474665 TMEM121BQ9BXQ6 578 aaPredicted RBP7.31□□□□□ -1.24
LIMD1-204ENST00000474665 PACSIN1Q9BY11 444 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 FOXQ1Q9C009 403 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 RAB6CQ9H0N0 254 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms