RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 DCDC2CA8MYV0 355 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 M0QYT0 321 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 NCAM2O15394 837 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 KCNN4O15554 427 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 POMCP01189 267 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 LTFP02788 710 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 CYP2C18P33260 490 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 BASP1P80723 227 aaKnown RBP22.57■■□□□ 1.2
CCM2-206ENST00000474617 CDK16Q00536 496 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 CCDC38Q502W7 563 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 RAB6CQ53S08 254 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 PRUNE1Q86TP1 453 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 NLRP14Q86W24 1093 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 UHMK1Q8TAS1 419 aaKnown RBP22.57■■□□□ 1.2
CCM2-206ENST00000474617 MYLPFQ96A32 169 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 RAB6CQ9H0N0 254 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 LRRC4CQ9HCJ2 640 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 GPATCH2LQ9NWQ4 482 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 EURLQ9NYK6 297 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 A0A1W2PQ45 241 aaPredicted RBP22.56■■□□□ 1.2
CCM2-206ENST00000474617 A0A1W2PQY0 241 aa22.56■■□□□ 1.2
CCM2-206ENST00000474617 ARVCFO00192 962 aa22.56■■□□□ 1.2
CCM2-206ENST00000474617 BEST1O76090 585 aa22.56■■□□□ 1.2
CCM2-206ENST00000474617 TPSB2P20231 275 aa22.56■■□□□ 1.2
CCM2-206ENST00000474617 HTR7P34969 479 aa22.56■■□□□ 1.2
CCM2-206ENST00000474617 SLCO1A2P46721 670 aa22.56■■□□□ 1.2
CCM2-206ENST00000474617 AFF1P51825 1210 aaKnown RBP22.56■■□□□ 1.2
CCM2-206ENST00000474617 IFI35P80217 286 aaPredicted RBP22.56■■□□□ 1.2
CCM2-206ENST00000474617 BFSP2Q13515 415 aa22.56■■□□□ 1.2
CCM2-206ENST00000474617 PDK1Q15118 436 aa22.56■■□□□ 1.2
CCM2-206ENST00000474617 TPSAB1Q15661 275 aa22.56■■□□□ 1.2
CCM2-206ENST00000474617 LHX8Q68G74 356 aa22.56■■□□□ 1.2
CCM2-206ENST00000474617 NPNTQ6UXI9 565 aa22.56■■□□□ 1.2
CCM2-206ENST00000474617 EXOC3L1Q86VI1 746 aa22.56■■□□□ 1.2
CCM2-206ENST00000474617 CCDC185Q8N715 623 aa22.56■■□□□ 1.2
CCM2-206ENST00000474617 XPO6Q96QU8 1125 aaKnown RBP22.56■■□□□ 1.2
CCM2-206ENST00000474617 PKMYT1Q99640 499 aa22.56■■□□□ 1.2
CCM2-206ENST00000474617 SELENOSQ9BQE4 189 aa22.56■■□□□ 1.2
CCM2-206ENST00000474617 INTS9Q9NV88 658 aaKnown RBP22.56■■□□□ 1.2
CCM2-206ENST00000474617 HHLA1C9JL84 531 aa22.55■■□□□ 1.2
CCM2-206ENST00000474617 KBTBD13C9JR72 458 aa22.55■■□□□ 1.2
CCM2-206ENST00000474617 PPP1R12AO14974 1030 aaPredicted RBP22.55■■□□□ 1.2
CCM2-206ENST00000474617 INHAP05111 366 aa22.55■■□□□ 1.2
CCM2-206ENST00000474617 TFE3P19532 575 aaPredicted RBP22.55■■□□□ 1.2
CCM2-206ENST00000474617 SARNPP82979 210 aaKnown RBP22.55■■□□□ 1.2
CCM2-206ENST00000474617 DSC1Q08554 894 aa22.55■■□□□ 1.2
CCM2-206ENST00000474617 HEATR6Q6AI08 1181 aaKnown RBP22.55■■□□□ 1.2
CCM2-206ENST00000474617 TRAF7Q6Q0C0 670 aa22.55■■□□□ 1.2
CCM2-206ENST00000474617 VPS52Q8N1B4 723 aa22.55■■□□□ 1.2
CCM2-206ENST00000474617 ZMIZ2Q8NF64 920 aa22.55■■□□□ 1.2
CCM2-206ENST00000474617 RNF139Q8WU17 664 aa22.55■■□□□ 1.2
CCM2-206ENST00000474617 TFB1MQ8WVM0 346 aaKnown RBP22.55■■□□□ 1.2
CCM2-206ENST00000474617 OLFM3Q96PB7 478 aa22.55■■□□□ 1.2
CCM2-206ENST00000474617 CCT8L2Q96SF2 557 aa22.55■■□□□ 1.2
CCM2-206ENST00000474617 RTP3Q9BQQ7 232 aa22.55■■□□□ 1.2
CCM2-206ENST00000474617 VPS37BQ9H9H4 285 aa22.55■■□□□ 1.2
CCM2-206ENST00000474617 DNAJC17Q9NVM6 304 aaKnown RBP22.55■■□□□ 1.2
CCM2-206ENST00000474617 COL4A4P53420 1690 aaPredicted RBP22.55■■□□□ 1.2
CCM2-206ENST00000474617 TRPA1O75762 1119 aa22.54■■□□□ 1.2
CCM2-206ENST00000474617 CHN1P15882 459 aa22.54■■□□□ 1.2
CCM2-206ENST00000474617 ADRA1BP35368 520 aa22.54■■□□□ 1.2
CCM2-206ENST00000474617 FDFT1P37268 417 aa22.54■■□□□ 1.2
CCM2-206ENST00000474617 CAP1Q01518 475 aa22.54■■□□□ 1.2
CCM2-206ENST00000474617 PAFAH1B3Q15102 231 aaKnown RBP22.54■■□□□ 1.2
CCM2-206ENST00000474617 NOMO2Q5JPE7 1267 aa22.54■■□□□ 1.2
CCM2-206ENST00000474617 OTUD1Q5VV17 481 aaPredicted RBP22.54■■□□□ 1.2
CCM2-206ENST00000474617 NCBP2-AS2Q69YL0 99 aa22.54■■□□□ 1.2
CCM2-206ENST00000474617 CD300LGQ6UXG3 332 aa22.54■■□□□ 1.2
CCM2-206ENST00000474617 FAM131BQ86XD5 332 aa22.54■■□□□ 1.2
CCM2-206ENST00000474617 ACSS3Q9H6R3 686 aa22.54■■□□□ 1.2
CCM2-206ENST00000474617 TMEM161AQ9NX61 479 aa22.54■■□□□ 1.2
CCM2-206ENST00000474617 SAGE1Q9NXZ1 904 aa22.54■■□□□ 1.2
CCM2-206ENST00000474617 PSMC3IPQ9P2W1 217 aaPredicted RBP22.54■■□□□ 1.2
CCM2-206ENST00000474617 FBXW11Q9UKB1 542 aa22.54■■□□□ 1.2
CCM2-206ENST00000474617 NAALADL1Q9UQQ1 740 aa22.54■■□□□ 1.2
CCM2-206ENST00000474617 CLUHO75153 1309 aa22.53■■□□□ 1.2
CCM2-206ENST00000474617 MTSS1O43312 755 aa22.53■■□□□ 1.2
CCM2-206ENST00000474617 FKTNO75072 461 aa22.53■■□□□ 1.2
CCM2-206ENST00000474617 DGKIO75912 1065 aa22.53■■□□□ 1.2
CCM2-206ENST00000474617 SELPP16109 830 aa22.53■■□□□ 1.2
CCM2-206ENST00000474617 RBL1P28749 1068 aa22.53■■□□□ 1.2
CCM2-206ENST00000474617 GEMIN4P57678 1058 aaKnown RBP22.53■■□□□ 1.2
CCM2-206ENST00000474617 YWHAHQ04917 246 aaPredicted RBP22.53■■□□□ 1.2
CCM2-206ENST00000474617 SKIDA1Q1XH10 827 aa22.53■■□□□ 1.2
CCM2-206ENST00000474617 ARHGEF18Q6ZSZ5 1173 aa22.53■■□□□ 1.2
CCM2-206ENST00000474617 PALM2Q8IXS6 379 aa22.53■■□□□ 1.2
CCM2-206ENST00000474617 DCP1BQ8IZD4 617 aaKnown RBP22.53■■□□□ 1.2
CCM2-206ENST00000474617 FUBP3Q96I24 572 aaKnown RBP eCLIP22.53■■□□□ 1.2
CCM2-206ENST00000474617 PWWP2AQ96N64 755 aa22.53■■□□□ 1.2
CCM2-206ENST00000474617 XAB2Q9HCS7 855 aaKnown RBP22.53■■□□□ 1.2
CCM2-206ENST00000474617 SSU72Q9NP77 194 aaKnown RBP22.53■■□□□ 1.2
CCM2-206ENST00000474617 ARHGEF4Q9NR80 690 aa22.53■■□□□ 1.2
CCM2-206ENST00000474617 RAB6BQ9NRW1 208 aa22.53■■□□□ 1.2
CCM2-206ENST00000474617 SMG5Q9UPR3 1016 aaKnown RBP22.53■■□□□ 1.2
CCM2-206ENST00000474617 INPP5FQ9Y2H2 1132 aa22.53■■□□□ 1.2
CCM2-206ENST00000474617 TIMM13Q9Y5L4 95 aaPredicted RBP22.53■■□□□ 1.2
CCM2-206ENST00000474617 FRMPD3Q5JV73 1810 aa22.53■■□□□ 1.2
CCM2-206ENST00000474617 SYN3O14994 580 aa22.52■■□□□ 1.2
CCM2-206ENST00000474617 OPHN1O60890 802 aa22.52■■□□□ 1.2
CCM2-206ENST00000474617 GLUD2P49448 558 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms