RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 SH3GL3Q99963 347 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 AGXT2Q9BYV1 514 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 PHACTR1Q9C0D0 580 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 ROGDIQ9GZN7 287 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 POLR1EQ9GZS1 481 aaKnown RBP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 ST6GALNAC4Q9H4F1 302 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 COG4Q9H9E3 785 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 INTS9Q9NV88 658 aaKnown RBP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 RNF186Q9NXI6 227 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 AFF4Q9UHB7 1163 aaKnown RBP4.77□□□□□ -1.65
CCNL1-215ENST00000474539 PCDHB11Q9Y5F2 797 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 PCDHGC5Q9Y5F6 944 aa4.77□□□□□ -1.65
CCNL1-215ENST00000474539 TRPC5OSA6NMA1 111 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 SOBPA7XYQ1 873 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 VSTM5A8MXK1 200 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 POC1B-GALNT4F8VUJ3 575 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 PITPNM1O00562 1244 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 ATP2C2O75185 946 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 KATNA1O75449 491 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 RECQL4O94761 1208 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 HMBSP08397 361 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 GFAPP14136 432 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 HSD17B2P37059 387 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 YBEYP58557 167 aaPredicted RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 CNGA2Q16280 664 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 PDCD2Q16342 344 aaPredicted RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 RBBP7Q16576 425 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 HIF1AQ16665 826 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 FBXO43Q4G163 708 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 SETMARQ53H47 684 aaPredicted RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 SERPINA13PQ6UXR4 307 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 CLYBLQ8N0X4 340 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 ZFP28Q8NHY6 868 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 RSRC1Q96IZ7 334 aaKnown RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 MS4A14Q96JA4 679 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 ABCG4Q9H172 646 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 SFXN1Q9H9B4 322 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 C3orf14Q9HBI5 128 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 CASS4Q9NQ75 786 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 RGS18Q9NS28 235 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 EIF3LQ9Y262 564 aaKnown RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 NEMP2A6NFY4 417 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 SMIM22K7EJ46 135 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 CYP26A1O43174 497 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 VEGFDO43915 354 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 PHF2O75151 1096 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 IGHEP01854 428 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 TSHRP16473 764 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 PTPN1P18031 435 aaKnown RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 VARSP26640 1264 aaKnown RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 TYK2P29597 1187 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 SCNN1AP37088 669 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 MDM2Q00987 491 aaPredicted RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 KIF19Q2TAC6 998 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 ZRANB3Q5FWF4 1079 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 EMC10Q5UCC4 262 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 CACHD1Q5VU97 1274 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 KRT78Q8N1N4 520 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 TRIML2Q8N7C3 387 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 SNX31Q8N9S9 440 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 PCYOX1LQ8NBM8 494 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 SRFBP1Q8NEF9 429 aaKnown RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 OXER1Q8TDS5 423 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 VPS33AQ96AX1 596 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 FEM1CQ96JP0 617 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 ROPN1BQ9BZX4 212 aaPredicted RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 TRIT1Q9H3H1 467 aaKnown RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 ROPN1Q9HAT0 212 aaPredicted RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 ABCB6Q9NP58 842 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 ELOVL2Q9NXB9 296 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 TNPO3Q9Y5L0 923 aaKnown RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 DYTNA2CJ06 578 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 NFKBIEO00221 500 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 E2F3O00716 465 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 FGGP02679 453 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 ANXA5P08758 320 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 OCM2P0CE71 109 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 OCMP0CE72 109 aaPredicted RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 NPR3P17342 541 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 RPL22P35268 128 aaKnown RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 FLT3P36888 993 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 GTF2BQ00403 316 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 EFTUD2Q15029 972 aaKnown RBP eCLIP4.76□□□□□ -1.658e-11■■■□□ 17.4
CCNL1-215ENST00000474539 SLC39A12Q504Y0 691 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 COBLL1Q53SF7 1204 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 BHLHB9Q6PI77 547 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 KIAA1324Q6UXG2 1013 aaKnown RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 ANO5Q75V66 913 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 PPIL6Q8IXY8 311 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 TCAIMQ8N3R3 496 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 TTC29Q8NA56 475 aaPredicted RBP4.76□□□□□ -1.65
CCNL1-215ENST00000474539 CATSPER1Q8NEC5 780 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 NLGN2Q8NFZ4 835 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 LRRC39Q96DD0 335 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 CXorf40BQ96DE9 158 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 ACBD6Q9BR61 282 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 DPH5Q9H2P9 285 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 SAYSD1Q9NPB0 183 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 GID8Q9NWU2 228 aa4.76□□□□□ -1.65
CCNL1-215ENST00000474539 KLHL28Q9NXS3 571 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms