RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 MT-CO1P00395 513 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 POMCP01189 267 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 ASLP04424 464 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 ARP10275 920 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 PRPS2P11908 318 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 BMP1P13497 986 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 CTSSP25774 331 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 PCSK1P29120 753 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 HLA-FP30511 346 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 LRPAP1P30533 357 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 CAMLGP49069 296 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 CLCN5P51795 746 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 AIF1P55008 147 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 ADAM17P78536 824 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 ELP6Q0PNE2 266 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 BFSP1Q12934 665 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 CUL4AQ13619 759 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 GRIK5Q16478 980 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 TSTQ16762 297 aaKnown RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 SNAP47Q5SQN1 464 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 GTF2IRD2BQ6EKJ0 949 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 CASC4Q6P4E1 433 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 RTL4Q6ZR62 310 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 MSANTD1Q6ZTZ1 278 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 THAP5Q7Z6K1 395 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 GTF2IRD2Q86UP8 949 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 TICAM1Q8IUC6 712 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 KDF1Q8NAX2 398 aaPredicted RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 OR52M1Q8NGK5 317 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 ETNPPLQ8TBG4 499 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 METTL6Q8TCB7 284 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 ZNF384Q8TF68 577 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 NSMCE1Q8WV22 266 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 POMGNT1Q8WZA1 660 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 ZNF707Q96C28 371 aaPredicted RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 ZNF570Q96NI8 536 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 TOX2Q96NM4 488 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 CLIC6Q96NY7 704 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 GPR61Q9BZJ8 451 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 PUS7LQ9H0K6 701 aaKnown RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 SP140LQ9H930 580 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 SNX15Q9NRS6 342 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 SAMD15Q9P1V8 674 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 STX18Q9P2W9 335 aaKnown RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 AKT3Q9Y243 479 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 VWA7Q9Y334 891 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 GPSM3Q9Y4H4 160 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 PCDHGA9Q9Y5G4 932 aaKnown RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 CYP46A1Q9Y6A2 500 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 UBN2Q6ZU65 1347 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 A0A0U1RQV5 110 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 A0A1W2PN81 502 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 PRR23AA6NEV1 266 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 MIF4GDA9UHW6 222 aaKnown RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 K7ERQ8 282 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 TRAF5O00463 557 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 NEMP1O14524 444 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 DCLK1O15075 740 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 EIF2S1P05198 315 aaKnown RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 KRT7P08729 469 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 CYP19A1P11511 503 aaPredicted RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 PRG2P13727 222 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 CCNE1P24864 410 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 RPA1P27694 616 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 CHRNA7P36544 502 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 RGS19P49795 217 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 ZP2Q05996 745 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 KIAA1161Q6NSJ0 714 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 TRAT1Q6PIZ9 186 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 ARMCX2Q7L311 632 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 RABEPKQ7Z6M1 372 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 TMEM200AQ86VY9 491 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 LONP2Q86WA8 852 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 ZSWIM9Q86XI8 627 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 HERC6Q8IVU3 1022 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 MICALL2Q8IY33 904 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 MB21D2Q8IYB1 491 aaPredicted RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 MAML2Q8IZL2 1156 aaPredicted RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 KLHL36Q8N4N3 616 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 MINDY1Q8N5J2 469 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 ALLCQ8N6M5 410 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 C12orf50Q8NA57 414 aaPredicted RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 DDX17Q92841 729 aaKnown RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 TRIM63Q969Q1 353 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 TOE1Q96GM8 510 aaKnown RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 PIWIL1Q96J94 861 aaKnown RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 TUBGCP5Q96RT8 1024 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 SLC9A7Q96T83 725 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 ACO2Q99798 780 aaKnown RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 OSBPL7Q9BZF2 842 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 NIF3L1Q9GZT8 377 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 ABCG8Q9H221 673 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 AGO3Q9H9G7 860 aaKnown RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 TREM1Q9NP99 234 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 INTS9Q9NV88 658 aaKnown RBP3.61□□□□□ -1.83
UBR3-208ENST00000474426 SPATA2Q9UM82 520 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 CAPN11Q9UMQ6 739 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 NAALADL1Q9UQQ1 740 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 ENTPD4Q9Y227 616 aa3.61□□□□□ -1.83
UBR3-208ENST00000474426 ERGIC3Q9Y282 383 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms