RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 MVB12BQ9H7P6 319 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 C12orf10Q9HB07 376 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 SLC35D1Q9NTN3 355 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 IL37Q9NZH6 218 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 DPP7Q9UHL4 492 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 SLC39A10Q9ULF5 831 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 SNX6Q9UNH7 406 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 CLCA2Q9UQC9 943 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 SIK3Q9Y2K2 1263 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 DERAQ9Y315 318 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 BRCA2P51587 3418 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 RNF103-CHMP3A0A140T963 221 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 E7EVH7 732 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 H0YAE9 185 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 H7BY64 318 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 RNF103O00237 685 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 NCK2O43639 380 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 GUCY1B2O75343 617 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 RECQL4O94761 1208 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 STAU1O95793 577 aaKnown RBP6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 PNPP00491 289 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 ADRB1P08588 477 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 TPBGLP0DKB5 382 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 HNRNPLP14866 589 aaKnown RBP eCLIP6.33□□□□□ -1.43e-11■■□□□ 13.3
SMARCE1-208ENST00000474246 AKT1P31749 480 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 ADCY8P40145 1251 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 PIK3CBP42338 1070 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 HSPA13P48723 471 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 HIRAP54198 1017 aaPredicted RBP6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 PCSK7Q16549 785 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 FAM110CQ1W6H9 321 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 FSCBQ5H9T9 825 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 FAM209BQ5JX69 171 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 HGSNATQ68CP4 663 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 NCAPH2Q6IBW4 605 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 KRT78Q8N1N4 520 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 TMEM102Q8N9M5 508 aaPredicted RBP6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 C3orf58Q8NDZ4 430 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 C1orf162Q8NEQ5 155 aaPredicted RBP6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 SCFD2Q8WU76 684 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 DEPDC1BQ8WUY9 529 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 TMEM40Q8WWA1 233 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 DYDC1Q8WWB3 177 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 SLC9A6Q92581 669 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 INPP5DQ92835 1189 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 TMEM41AQ96HV5 264 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 ALS2CR12Q96Q35 445 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 NR1H4Q96RI1 486 aaPredicted RBP6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 TRIM56Q9BRZ2 755 aaKnown RBP6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 SORBS1Q9BX66 1292 aaKnown RBP6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 MRPL4Q9BYD3 311 aaKnown RBP6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 SRCIN1Q9C0H9 1055 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 ZMAT3Q9HA38 289 aaKnown RBP6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 KIF9Q9HAQ2 790 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 C17orf75Q9HAS0 396 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 DMRT3Q9NQL9 472 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 FAM114A2Q9NRY5 505 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 ZNF148Q9UQR1 794 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 PCDHGA11Q9Y5H2 935 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 RGPD5Q99666 1765 aa6.33□□□□□ -1.4
SMARCE1-208ENST00000474246 XKRY2A2RUG3 117 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 WDR91A4D1P6 747 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 H3BQV1 296 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 PGRMC2O15173 223 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 ULK1O75385 1050 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 CLPTM1O96005 669 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 ITGB3P05106 788 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 GLAP06280 429 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 ASNSP08243 561 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 FGF4P08620 206 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 PRR35P0CG20 571 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 CCNA2P20248 432 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 SDHBP21912 280 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 GRK4P32298 578 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 SCNN1BP51168 640 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 ROR2Q01974 943 aaKnown RBP6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 TAP2Q03519 686 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 GFPT1Q06210 699 aaPredicted RBP6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 MAP4K2Q12851 820 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 CSTF3Q12996 717 aaKnown RBP6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 MAPK7Q13164 816 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 KLF1Q13351 362 aaPredicted RBP6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 MORF4L2Q15014 288 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 SURF1Q15526 300 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 FBXO47Q5MNV8 452 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 SNX30Q5VWJ9 437 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 DARS2Q6PI48 645 aaKnown RBP6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 UNC13DQ70J99 1090 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 OVCH2Q7RTZ1 564 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 ZSCAN1Q8NBB4 408 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 CLHC1Q8NHS4 586 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 GRIN3AQ8TCU5 1115 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 HDAC10Q969S8 669 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 VCPIP1Q96JH7 1222 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 RHOVQ96L33 236 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 CEP19Q96LK0 163 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 CAMK1GQ96NX5 476 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 FUT8Q9BYC5 575 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 TTYH3Q9C0H2 523 aa6.32□□□□□ -1.4
SMARCE1-208ENST00000474246 NTN4Q9HB63 628 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms