RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 GCATO75600 419 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 C1QL1O75973 258 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 NTSR2O95665 410 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 SLC3A2P08195 630 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 NPPBP16860 134 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 DUSP1P28562 367 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 NTSR1P30989 418 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 DIO1P49895 249 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 ZNF81P51508 661 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 RENBPP51606 427 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 TUBA4AP68366 448 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 DNASE1L3Q13609 305 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 LARS2Q15031 903 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 PDCD2Q16342 344 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 FAM187BQ17R55 369 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 RNASE12Q5GAN4 147 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 TMEM65Q6PI78 240 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 C1orf228Q6PIY5 440 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 NAPRTQ6XQN6 538 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 DPY19L3Q6ZPD9 716 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 ZNF788Q6ZQV5 615 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 BCDIN3DQ7Z5W3 292 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 SPICE1Q8N0Z3 855 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 C11orf44Q8N8P7 122 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 Q8N9P0 234 aaPredicted RBP3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 ZNF527Q8NB42 609 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 FAR2Q96K12 515 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 ZNF778Q96MU6 729 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 ASB2Q96Q27 587 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 RPS6KC1Q96S38 1066 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 WDR12Q9GZL7 423 aaKnown RBP3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 SLC52A1Q9NWF4 448 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 FLRT1Q9NZU1 646 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 ADAM21Q9UKJ8 722 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 A0A087WV62 115 aa3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 GXYLT2A0PJZ3 443 aa3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 TMEM232C9JQI7 657 aa3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 CBFA2T3O75081 653 aa3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 SRGAP2BP0DMP2 458 aa3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 TMIGD3P0DMS9 266 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 PECAM1P16284 738 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 PSG6Q00889 435 aa3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 MTAPQ13126 283 aa3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 SEMA3BQ13214 749 aa3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 BLMHQ13867 455 aa3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 KCNB1Q14721 858 aa3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 PROSER3Q2NL68 480 aa3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 AASDHQ4L235 1098 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 GLE1Q53GS7 698 aaKnown RBP3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 PRAMEF17Q5VTA0 474 aa3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 RAP1GAP2Q684P5 730 aa3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 C1QL2Q7Z5L3 287 aa3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 C16orf71Q8IYS4 520 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 METTL25Q8N6Q8 603 aa3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 FAM71BQ8TC56 605 aa3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 EID2BQ96D98 161 aa3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 PAAF1Q9BRP4 392 aa3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 TP63Q9H3D4 680 aaPredicted RBP3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 FBXO28Q9NVF7 368 aa3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 SERGEFQ9UGK8 458 aa3.81□□□□□ -1.8
ECHDC1-213ENST00000474240 PNMA6EA0A0J9YXQ4 647 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 LRRC3CA6NJW4 275 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 SYT5O00445 386 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 ITGA2BP08514 1039 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 ITGA5P08648 1049 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 APEHP13798 732 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 DRD1P21728 446 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 FPR3P25089 353 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 MCM5P33992 734 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 JAK3P52333 1124 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 COPB1P53618 953 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 PTK2BQ14289 1009 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 ZACNQ401N2 412 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 TMEM196Q5HYL7 178 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 TMTC4Q5T4D3 741 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 FAM90A2PQ658T7 463 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 ANO7Q6IWH7 933 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 ZNF813Q6ZN06 617 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 DCDC5Q6ZRR9 648 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 OR52L2PQ8NGH6 319 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 MAFAQ8NHW3 353 aaPredicted RBP3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 GLMPQ8WWB7 406 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 EDC3Q96F86 508 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 SLC39A13Q96H72 371 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 PRPF18Q99633 342 aaKnown RBP3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 ADGRE3Q9BY15 652 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 FNIP2Q9P278 1114 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 FZD4Q9ULV1 537 aa3.8□□□□□ -1.8
ECHDC1-213ENST00000474240 AOX1Q06278 1338 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 hCG_1642624A0A1W2PR95 340 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 F5H423 210 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 PDE8BO95263 885 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 TUBB4AP04350 444 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 SERPINB3P29508 390 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 IGHMBP2P38935 993 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 CDK7P50613 346 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 GPC5P78333 572 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 FOXO1Q12778 655 aa3.79□□□□□ -1.8
ECHDC1-213ENST00000474240 CHAF1AQ13111 956 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms