RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 KLF8O95600 359 aaPredicted RBP21.41■■□□□ 1.02
SNX13-206ENST00000474067 GNA15P30679 374 aa21.41■■□□□ 1.02
SNX13-206ENST00000474067 BPIFB4P59827 614 aa21.41■■□□□ 1.02
SNX13-206ENST00000474067 PTK2Q05397 1052 aa21.41■■□□□ 1.02
SNX13-206ENST00000474067 DMWDQ09019 674 aa21.41■■□□□ 1.02
SNX13-206ENST00000474067 NUGGCQ68CJ6 796 aa21.41■■□□□ 1.02
SNX13-206ENST00000474067 C12orf40Q86WS4 652 aa21.41■■□□□ 1.02
SNX13-206ENST00000474067 TXNDC5Q8NBS9 432 aaKnown RBP21.41■■□□□ 1.02
SNX13-206ENST00000474067 TFAP2BQ92481 460 aa21.41■■□□□ 1.02
SNX13-206ENST00000474067 KAT5Q92993 513 aa21.41■■□□□ 1.02
SNX13-206ENST00000474067 ZC3H10Q96K80 434 aaKnown RBP21.41■■□□□ 1.02
SNX13-206ENST00000474067 MED15Q96RN5 788 aa21.41■■□□□ 1.02
SNX13-206ENST00000474067 BCCIPQ9P287 314 aaKnown RBP eCLIP21.41■■□□□ 1.028e-7■■■■□ 21.9
SNX13-206ENST00000474067 KIAA1549LQ6ZVL6 1849 aa21.41■■□□□ 1.02
SNX13-206ENST00000474067 TYW5A2RUC4 315 aaKnown RBP21.4■■□□□ 1.02
SNX13-206ENST00000474067 THAP12O43422 761 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 LETM1O95202 739 aaPredicted RBP21.4■■□□□ 1.02
SNX13-206ENST00000474067 MBD3O95983 291 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 LTFP02788 710 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 EEF1GP26641 437 aaKnown RBP21.4■■□□□ 1.02
SNX13-206ENST00000474067 USP8P40818 1118 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 KIR2DL1P43626 348 aaPredicted RBP21.4■■□□□ 1.02
SNX13-206ENST00000474067 TRIP4Q15650 581 aaPredicted RBP21.4■■□□□ 1.02
SNX13-206ENST00000474067 DPCR1Q3MIW9 517 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 MPPE1Q53F39 396 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 PMF1Q6P1K2 205 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 MSANTD2Q6P1R3 559 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 BEND5Q7L4P6 421 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 RASSF3Q86WH2 238 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 DENND1CQ8IV53 801 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 FMNL3Q8IVF7 1028 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 PHTF2Q8N3S3 785 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 ALLCQ8N6M5 410 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 IL17RCQ8NAC3 791 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 ANKRD20A12PQ8NF67 263 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 KREMEN1Q96MU8 473 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 TUBGCP2Q9BSJ2 902 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 NDST4Q9H3R1 872 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 ST7Q9NRC1 585 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 C2orf42Q9NWW7 574 aa21.4■■□□□ 1.02
SNX13-206ENST00000474067 AGO1Q9UL18 857 aaKnown RBP21.4■■□□□ 1.02
SNX13-206ENST00000474067 YJEFN3A6XGL0 299 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 E7ENQ6 273 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 RNF225M0QZC1 329 aaPredicted RBP21.39■■□□□ 1.01
SNX13-206ENST00000474067 TULP2O00295 520 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 GFRA2O00451 464 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 PES1O00541 588 aaKnown RBP21.39■■□□□ 1.01
SNX13-206ENST00000474067 CAPN9O14815 690 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 HMBSP08397 361 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 NTSR1P30989 418 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 SLC11A2P49281 568 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 RGS7P49802 495 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 RING1Q06587 406 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 NNTQ13423 1086 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 PUM1Q14671 1186 aaKnown RBP eCLIP21.39■■□□□ 1.01
SNX13-206ENST00000474067 EIF4HQ15056 248 aaKnown RBP21.39■■□□□ 1.01
SNX13-206ENST00000474067 LPAL2Q16609 132 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 VWA3BQ502W6 1294 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 ERMP1Q7Z2K6 904 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 DCLK2Q8N568 766 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 CCDC33Q8N5R6 958 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 FAM160A2Q8N612 972 aaPredicted RBP21.39■■□□□ 1.01
SNX13-206ENST00000474067 ZNF606Q8WXB4 792 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 SERPINB11Q96P15 392 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 CRACR2AQ9BSW2 395 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 LMBRD1Q9NUN5 540 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 SLC27A6Q9Y2P4 619 aa21.39■■□□□ 1.01
SNX13-206ENST00000474067 RIF1Q5UIP0 2472 aaKnown RBP21.39■■□□□ 1.01
SNX13-206ENST00000474067 IRAK2O43187 625 aa21.38■■□□□ 1.01
SNX13-206ENST00000474067 PENKP01210 267 aaPredicted RBP21.38■■□□□ 1.01
SNX13-206ENST00000474067 DPP6P42658 865 aa21.38■■□□□ 1.01
SNX13-206ENST00000474067 PXNP49023 591 aaPredicted RBP21.38■■□□□ 1.01
SNX13-206ENST00000474067 CSRP2Q16527 193 aa21.38■■□□□ 1.01
SNX13-206ENST00000474067 ANO7Q6IWH7 933 aa21.38■■□□□ 1.01
SNX13-206ENST00000474067 SASS6Q6UVJ0 657 aa21.38■■□□□ 1.01
SNX13-206ENST00000474067 CCDC117Q8IWD4 279 aaPredicted RBP21.38■■□□□ 1.01
SNX13-206ENST00000474067 CHPFQ8IZ52 775 aa21.38■■□□□ 1.01
SNX13-206ENST00000474067 DDI1Q8WTU0 396 aa21.38■■□□□ 1.01
SNX13-206ENST00000474067 WBP2Q969T9 261 aa21.38■■□□□ 1.01
SNX13-206ENST00000474067 FAM149B1Q96BN6 582 aa21.38■■□□□ 1.01
SNX13-206ENST00000474067 TIMM44O43615 452 aa21.37■■□□□ 1.01
SNX13-206ENST00000474067 NCAM1P13591 858 aa21.37■■□□□ 1.01
SNX13-206ENST00000474067 HOXB2P14652 356 aa21.37■■□□□ 1.01
SNX13-206ENST00000474067 SLC9A1P19634 815 aa21.37■■□□□ 1.01
SNX13-206ENST00000474067 PON1P27169 355 aa21.37■■□□□ 1.01
SNX13-206ENST00000474067 GBP1P32455 592 aa21.37■■□□□ 1.01
SNX13-206ENST00000474067 GPD2P43304 727 aa21.37■■□□□ 1.01
SNX13-206ENST00000474067 ARID5AQ03989 594 aa21.37■■□□□ 1.01
SNX13-206ENST00000474067 MTA1Q13330 715 aa21.37■■□□□ 1.01
SNX13-206ENST00000474067 ARHGAP44Q17R89 818 aa21.37■■□□□ 1.01
SNX13-206ENST00000474067 BHLHA9Q7RTU4 235 aa21.37■■□□□ 1.01
SNX13-206ENST00000474067 FAM217AQ8IXS0 508 aa21.37■■□□□ 1.01
SNX13-206ENST00000474067 PGBD3Q8N328 593 aa21.37■■□□□ 1.01
SNX13-206ENST00000474067 SHC3Q92529 594 aa21.37■■□□□ 1.01
SNX13-206ENST00000474067 EDEM1Q92611 657 aa21.37■■□□□ 1.01
SNX13-206ENST00000474067 AZIN2Q96A70 460 aa21.37■■□□□ 1.01
SNX13-206ENST00000474067 TMEM51Q9NW97 253 aa21.37■■□□□ 1.01
SNX13-206ENST00000474067 STOML2Q9UJZ1 356 aa21.37■■□□□ 1.01
SNX13-206ENST00000474067 FBXO10Q9UK96 956 aa21.37■■□□□ 1.01
SNX13-206ENST00000474067 CDV3Q9UKY7 258 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms