RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 ZNF503-AS2A6NEH8 195 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 ACKR2O00590 384 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 RASGRF2O14827 1237 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 TLR3O15455 904 aaKnown RBP6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 GRIN3BO60391 1043 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 ASS1P00966 412 aaKnown RBP6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 GH1P01241 217 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 KRT19P08727 400 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 KRT7P08729 469 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 TXNP10599 105 aaKnown RBP6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 MCF2P10911 925 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 SRFP11831 508 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 CD19P15391 556 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 RRM1P23921 792 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 MARK3P27448 753 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 ECHS1P30084 290 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 ATICP31939 592 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 LSP1P33241 339 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 GJC1P36383 396 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 RPL21P46778 160 aaKnown RBP6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 NOMO3P69849 1222 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 CDC42EP1Q00587 391 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 SP2Q02086 613 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 PDCLQ13371 301 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 CCNG2Q16589 344 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 PTGISQ16647 500 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 SKIDA1Q1XH10 827 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 ZNF648Q5T619 568 aaPredicted RBP6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 FYB2Q5VWT5 728 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 LMBRD2Q68DH5 695 aaPredicted RBP6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 PLEKHA7Q6IQ23 1121 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 MMS22LQ6ZRQ5 1243 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 TSHZ1Q6ZSZ6 1077 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 USP50Q70EL3 339 aaPredicted RBP6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 MON1BQ7L1V2 547 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 EEPD1Q7L9B9 569 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 CCDC25Q86WR0 208 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 RHPN2Q8IUC4 686 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 SH2D3CQ8N5H7 860 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 OTUD6BQ8N6M0 293 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 DTWD2Q8NBA8 298 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 FBXO27Q8NI29 283 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 GIPC2Q8TF65 315 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 DYDC1Q8WWB3 177 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 P3H4Q92791 437 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 ART4Q93070 314 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 CYFIP2Q96F07 1278 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 PGM2Q96G03 612 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 KIRREL1Q96J84 757 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 CCDC74BQ96LY2 380 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 NLRP4Q96MN2 994 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 TTC25Q96NG3 672 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 SLC38A3Q99624 504 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 GPR20Q99678 358 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 ACO2Q99798 780 aaKnown RBP6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 NCAPGQ9BPX3 1015 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 TMEM109Q9BVC6 243 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 LRRC3Q9BY71 257 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 OSBPL8Q9BZF1 889 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 GPR62Q9BZJ7 368 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 PPCSQ9HAB8 311 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 CYP3A43Q9HB55 503 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 VTA1Q9NP79 307 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 SLC5A4Q9NY91 659 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 BTBD7Q9P203 1132 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 KLHL3Q9UH77 587 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 ANAPC5Q9UJX4 755 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 GGA2Q9UJY4 613 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 ADGRA2Q96PE1 1338 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 ARID2Q68CP9 1835 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 COL1A2P08123 1366 aa6.18□□□□□ -1.42
ATPAF1-204ENST00000474020 BRCA1P38398 1863 aaKnown RBP6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 SMCHD1A6NHR9 2005 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 A0A087WUV0 522 aaPredicted RBP6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 TLDC2A0PJX2 215 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 GMNCA6NCL1 334 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 IQCA1LA6NCM1 817 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 UNCXA6NJT0 531 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 CHURC1-FNTBB4DL54 471 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 ADM5C9JUS6 153 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 H0YHG0 523 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 MYO1CO00159 1063 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 STRNO43815 780 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 B4GALT4O60513 344 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 RNF8O76064 485 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 VNN1O95497 513 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 FAM107AO95990 144 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 PAEPP09466 180 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 CETPP11597 493 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 ATF7P17544 494 aaPredicted RBP6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 CD58P19256 250 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 ACO1P21399 889 aaKnown RBP6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 TPP2P29144 1249 aaPredicted RBP6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 MAGEA9P43362 315 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 MARCKSL1P49006 195 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 MAGOHP61326 146 aaKnown RBP6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 POU5F1BQ06416 359 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 MYO1EQ12965 1108 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 DRP2Q13474 957 aa6.17□□□□□ -1.42
ATPAF1-204ENST00000474020 MAMLD1Q13495 774 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms