RNA–Protein interactions for RNA: ENST00000473863.1

TRAIP-204, Transcript of TRAF interacting protein, human

TSL 4

Gene TRAIP, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAIP-204	ENST00000473863	JRKL	Q9Y4A0	524 aa		13.94	□□□□□ -0.18
TRAIP-204	ENST00000473863	ALG6	Q9Y672	507 aa		13.94	□□□□□ -0.18
TRAIP-204	ENST00000473863	MIF4GD	A9UHW6	222 aa	Known RBP	13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	ZNF197	O14709	1029 aa		13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	LINC01565	O15544	149 aa		13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	PSTPIP1	O43586	416 aa		13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	TBX10	O75333	385 aa		13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	RNF8	O76064	485 aa		13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	TRUB2	O95900	331 aa	Known RBP	13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	COMT	P21964	271 aa		13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	CTNNA1	P35221	906 aa	Known RBP	13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	SLC25A11	Q02978	314 aa	Known RBP	13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	ITIH3	Q06033	890 aa		13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	ZNF569	Q5MCW4	686 aa		13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	MEI1	Q5TIA1	1274 aa		13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	SYCE2	Q6PIF2	218 aa		13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	RSRC2	Q7L4I2	434 aa	Known RBP	13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	GPR149	Q86SP6	731 aa		13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	HS6ST3	Q8IZP7	471 aa		13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	SLC35F6	Q8N357	371 aa		13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	ARFGAP1	Q8N6T3	406 aa		13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	SHKBP1	Q8TBC3	707 aa		13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	SMG7	Q92540	1137 aa	Known RBP	13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	MRPS31	Q92665	395 aa	Known RBP	13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	HES6	Q96HZ4	224 aa		13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	FAM204A	Q9H8W3	233 aa		13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	HCFC1R1	Q9NWW0	138 aa		13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	CLEC1B	Q9P126	229 aa		13.93	□□□□□ -0.18
TRAIP-204	ENST00000473863	CCDC66	A2RUB6	948 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863		M0QYT0	321 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	MDM4	O15151	490 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	SPOP	O43791	374 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	MOSPD3	O75425	235 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	IGLV3-27	P01718	113 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	TFE3	P19532	575 aa	Predicted RBP	13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	CTNNA2	P26232	953 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	GBP1	P32455	592 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	CCR2	P41597	374 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	KPNA1	P52294	538 aa	Predicted RBP	13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	GNG11	P61952	73 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	PITX1	P78337	314 aa	Predicted RBP	13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	ATP11A	P98196	1134 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	RING1	Q06587	406 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	SCAP	Q12770	1279 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	MTA1	Q13330	715 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	PPP2R5D	Q14738	602 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	BRMS1L	Q5PSV4	323 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	PEX26	Q7Z412	305 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	PSTK	Q8IV42	348 aa	Known RBP	13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	TEKT4	Q8WW24	435 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	NTAN1	Q96AB6	310 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	MSLNL	Q96KJ4	702 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	C16orf45	Q96MC5	204 aa	Predicted RBP	13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	GOLPH3	Q9H4A6	298 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	IGFLR1	Q9H665	355 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	CCSER2	Q9H7U1	834 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	WDR6	Q9NNW5	1121 aa	Known RBP	13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	PIGV	Q9NUD9	493 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	DDIT4	Q9NX09	232 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	CALCOCO1	Q9P1Z2	691 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	DNMT3L	Q9UJW3	386 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	AMFR	Q9UKV5	643 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	TLR6	Q9Y2C9	796 aa		13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863	HBS1L	Q9Y450	684 aa	Known RBP	13.92	□□□□□ -0.18
TRAIP-204	ENST00000473863		A0A1W2PRU2	124 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	TMEM110-MUSTN1	A8MSY1	372 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	COCH	O43405	550 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	FTCD	O95954	541 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	KRT7	P08729	469 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	MYL4	P12829	197 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	WEE1	P30291	646 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	MIP	P30301	263 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	ATP5C1	P36542	298 aa	Known RBP	13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	CXCR3	P49682	368 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	SLC7A9	P82251	487 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	DEUP1	Q05D60	604 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	TRIP4	Q15650	581 aa	Predicted RBP	13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	HADH	Q16836	314 aa	Known RBP	13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	CDO1	Q16878	200 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	SLC5A9	Q2M3M2	681 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	ARHGAP15	Q53QZ3	475 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	C10orf120	Q5SQS8	335 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	RARS2	Q5T160	578 aa	Known RBP	13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	TMC5	Q6UXY8	1006 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	RHOT1	Q8IXI2	618 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	SLC39A13	Q96H72	371 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	WDR24	Q96S15	920 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	ADAM7	Q9H2U9	754 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	PIDD1	Q9HB75	910 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	MARCH2	Q9P0N8	246 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	THEG	Q9P2T0	379 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	USP18	Q9UMW8	372 aa		13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.91	□□□□□ -0.18
TRAIP-204	ENST00000473863	C5orf42	Q9H799	3197 aa		13.9	□□□□□ -0.18
TRAIP-204	ENST00000473863	TRAV19	A0A0A6YYK7	116 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms