RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 TRIM29Q14134 588 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 ZNF174Q15697 407 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 SFMBT2Q5VUG0 894 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 SNX30Q5VWJ9 437 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 KRT79Q5XKE5 535 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 ADALQ6DHV7 355 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 SLFN12LQ6IEE8 588 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 IGF2-ASQ6U949 168 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 CCDC81Q6ZN84 652 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 TPGS1Q6ZTW0 290 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 KCNK18Q7Z418 384 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 WBP2Q969T9 261 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 CCDC97Q96F63 343 aaPredicted RBP11.14□□□□□ -0.63
SSBP1-209ENST00000473783 PCED1BQ96HM7 432 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 VCPIP1Q96JH7 1222 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 ORAI3Q9BRQ5 295 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 BTBD1Q9H0C5 482 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 LHX5Q9H2C1 402 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 ASCL3Q9NQ33 180 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 FBXO10Q9UK96 956 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 AGO2Q9UKV8 859 aaKnown RBP11.14□□□□□ -0.63
SSBP1-209ENST00000473783 PAXBP1Q9Y5B6 917 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 CACNA1DQ01668 2161 aa11.14□□□□□ -0.63
SSBP1-209ENST00000473783 CLEC18AA5D8T8 446 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 K7ENM7 598 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 GREM1O60565 184 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 KRT38O76015 456 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 FSBPO95073 299 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 RTN3O95197 1032 aaPredicted RBP11.13□□□□□ -0.63
SSBP1-209ENST00000473783 IRF1P10914 325 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 MYF5P13349 255 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 ABCD1P33897 745 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 NFKB2Q00653 900 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 SOWAHAQ2M3V2 549 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 PRAMEF14Q5SWL7 426 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 CLEC18BQ6UXF7 455 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 KCTD17Q8N5Z5 321 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 C1orf127Q8N9H9 656 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 CLEC18CQ8NCF0 446 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 OR2T3Q8NH03 318 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 MYCBPAPQ8TBZ2 947 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 FBXO32Q969P5 355 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 DEPDC7Q96QD5 511 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.13□□□□□ -0.63
SSBP1-209ENST00000473783 TM6SF1Q9BZW5 370 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 CCSER2Q9H7U1 834 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 GDF3Q9NR23 364 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 ITGA11Q9UKX5 1188 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 ODF2LQ9ULJ1 636 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 STYXL1Q9Y6J8 313 aa11.13□□□□□ -0.63
SSBP1-209ENST00000473783 UTP20O75691 2785 aaKnown RBP11.13□□□□□ -0.63
SSBP1-209ENST00000473783 EPHX1P07099 455 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 SFTPCP11686 197 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 PLCG1P19174 1290 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 LMO2P25791 158 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 MFAP3P55082 362 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 SKOR1P84550 965 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 TFAMQ00059 246 aaKnown RBP11.12□□□□□ -0.63
SSBP1-209ENST00000473783 TLE1Q04724 770 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 ZBTB16Q05516 673 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 ST3GAL1Q11201 340 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 IFRD2Q12894 506 aaPredicted RBP11.12□□□□□ -0.63
SSBP1-209ENST00000473783 ZNF234Q14588 700 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 EIF4HQ15056 248 aaKnown RBP11.12□□□□□ -0.63
SSBP1-209ENST00000473783 TTC38Q5R3I4 469 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 LIMS2Q7Z4I7 341 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 NUP93Q8N1F7 819 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 OXR1Q8N573 874 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 SYT2Q8N9I0 419 aaPredicted RBP11.12□□□□□ -0.63
SSBP1-209ENST00000473783 CXorf38Q8TB03 319 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 CACTINQ8WUQ7 758 aaKnown RBP11.12□□□□□ -0.63
SSBP1-209ENST00000473783 KBTBD7Q8WVZ9 684 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 PSMG3-AS1Q96PY0 264 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 ELOVL4Q9GZR5 314 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 NACA2Q9H009 215 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 SGK2Q9HBY8 427 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 PDRG1Q9NUG6 133 aa11.12□□□□□ -0.63
SSBP1-209ENST00000473783 LSM7Q9UK45 103 aaKnown RBP11.12□□□□□ -0.63
SSBP1-209ENST00000473783 A0A1W2PPC4 97 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 ANKRD63C9JTQ0 380 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 USP12O75317 370 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 IGHV4-34P06331 123 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 ITGB6P18564 788 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 PRKCHP24723 683 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 RXRGP48443 463 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 SLC12A3P55017 1021 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 INHBCP55103 352 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 GOLGA8FQ08AF8 430 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 GOLGA8DPQ0D2H9 430 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 CAMK2GQ13555 558 aaPredicted RBP11.11□□□□□ -0.63
SSBP1-209ENST00000473783 GEN1Q17RS7 908 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 PROX2Q3B8N5 592 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 ARL13BQ3SXY8 428 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 SGO2Q562F6 1265 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 CDCP2Q5VXM1 449 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 KIAA0895LQ68EN5 471 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 CRELD2Q6UXH1 353 aaPredicted RBP11.11□□□□□ -0.63
SSBP1-209ENST00000473783 SERPINA13PQ6UXR4 307 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 CCDC83Q8IWF9 413 aa11.11□□□□□ -0.63
SSBP1-209ENST00000473783 C4orf32Q8N8J7 132 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms