RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 ATP5C1P36542 298 aaKnown RBP13.3□□□□□ -0.28
TRAF4-209ENST00000473421 CSNK1EP49674 416 aaKnown RBP13.3□□□□□ -0.28
TRAF4-209ENST00000473421 COPAP53621 1224 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 MFAP3P55082 362 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 CLDN6P56747 220 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 CYP4F3Q08477 520 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 CAMK2BQ13554 666 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 NCOA4Q13772 614 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 ENPP2Q13822 863 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 ZNF699Q32M78 642 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 SYCP2LQ5T4T6 812 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 FYB2Q5VWT5 728 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 DBX2Q6ZNG2 339 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 TMPRSS7Q7RTY8 843 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 FAM124AQ86V42 546 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 TMPRSS6Q8IU80 811 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 FOXJ1Q92949 421 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 SYAP1Q96A49 352 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-209ENST00000473421 DHX58Q96C10 678 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 XPO6Q96QU8 1125 aaKnown RBP13.3□□□□□ -0.28
TRAF4-209ENST00000473421 VRTNQ9H8Y1 702 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 SLC39A2Q9NP94 309 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 TM7SF3Q9NS93 570 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 WDR35Q9P2L0 1181 aa13.3□□□□□ -0.28
TRAF4-209ENST00000473421 THAP10Q9P2Z0 257 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-209ENST00000473421 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRAF4-209ENST00000473421 TRABD2BA6NFA1 517 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 GFRA2O00451 464 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 BCAT2O15382 392 aaPredicted RBP13.29□□□□□ -0.28
TRAF4-209ENST00000473421 PHACTR2O75167 634 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 PENKP01210 267 aaPredicted RBP13.29□□□□□ -0.28
TRAF4-209ENST00000473421 RARGP13631 454 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 GNSP15586 552 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 ATICP31939 592 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 BIRC3Q13489 604 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 PREPLQ4J6C6 727 aaPredicted RBP13.29□□□□□ -0.28
TRAF4-209ENST00000473421 ZNF667Q5HYK9 610 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 WDR45BQ5MNZ6 344 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 C1orf220Q5T0J3 134 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 SHC4Q6S5L8 630 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 CLEC20AQ6ZU45 233 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 NUDT18Q6ZVK8 323 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 CRYBG2Q8N1P7 616 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 PARD3BQ8TEW8 1205 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 PIWIL1Q96J94 861 aaKnown RBP13.29□□□□□ -0.28
TRAF4-209ENST00000473421 TNMDQ9H2S6 317 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 TLR8Q9NR97 1041 aaKnown RBP13.29□□□□□ -0.28
TRAF4-209ENST00000473421 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.29□□□□□ -0.28
TRAF4-209ENST00000473421 COMMD8Q9NX08 183 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 TFIP11Q9UBB9 837 aaKnown RBP13.29□□□□□ -0.28
TRAF4-209ENST00000473421 SUSD2Q9UGT4 822 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 SCML2Q9UQR0 700 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 MTMR6Q9Y217 621 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 APOBEC2Q9Y235 224 aaKnown RBP13.29□□□□□ -0.28
TRAF4-209ENST00000473421 CKAP5Q14008 2032 aa13.29□□□□□ -0.28
TRAF4-209ENST00000473421 ZBTB24O43167 697 aaPredicted RBP13.28□□□□□ -0.28
TRAF4-209ENST00000473421 HMBSP08397 361 aa13.28□□□□□ -0.28
TRAF4-209ENST00000473421 HLA-EP13747 358 aa13.28□□□□□ -0.28
TRAF4-209ENST00000473421 ASPAP45381 313 aa13.28□□□□□ -0.28
TRAF4-209ENST00000473421 CLDN10P78369 228 aa13.28□□□□□ -0.28
TRAF4-209ENST00000473421 ZNF234Q14588 700 aa13.28□□□□□ -0.28
TRAF4-209ENST00000473421 BMT2Q1RMZ1 405 aa13.28□□□□□ -0.28
TRAF4-209ENST00000473421 KIF19Q2TAC6 998 aa13.28□□□□□ -0.28
TRAF4-209ENST00000473421 C10orf120Q5SQS8 335 aa13.28□□□□□ -0.28
TRAF4-209ENST00000473421 STXBP4Q6ZWJ1 553 aa13.28□□□□□ -0.28
TRAF4-209ENST00000473421 METTL3Q86U44 580 aaKnown RBP13.28□□□□□ -0.28
TRAF4-209ENST00000473421 GRAMD1CQ8IYS0 662 aa13.28□□□□□ -0.28
TRAF4-209ENST00000473421 ZNF366Q8N895 744 aa13.28□□□□□ -0.28
TRAF4-209ENST00000473421 LINC00301Q8NCQ3 95 aa13.28□□□□□ -0.28
TRAF4-209ENST00000473421 RHBDD1Q8TEB9 315 aa13.28□□□□□ -0.28
TRAF4-209ENST00000473421 TNIP3Q96KP6 325 aa13.28□□□□□ -0.28
TRAF4-209ENST00000473421 C6orf106Q9H6K1 298 aaPredicted RBP13.28□□□□□ -0.28
TRAF4-209ENST00000473421 APOBEC3GQ9HC16 384 aaKnown RBP13.28□□□□□ -0.28
TRAF4-209ENST00000473421 FOXD4L1Q9NU39 408 aa13.28□□□□□ -0.28
TRAF4-209ENST00000473421 KIAA1522Q9P206 1035 aaPredicted RBP13.28□□□□□ -0.28
TRAF4-209ENST00000473421 SLC27A6Q9Y2P4 619 aa13.28□□□□□ -0.28
TRAF4-209ENST00000473421 SNX11Q9Y5W9 270 aa13.28□□□□□ -0.28
TRAF4-209ENST00000473421 ATP8B3O60423 1300 aa13.28□□□□□ -0.28
TRAF4-209ENST00000473421 EXOC3O60645 756 aa13.27□□□□□ -0.29
TRAF4-209ENST00000473421 IGLV3-19P01714 112 aa13.27□□□□□ -0.29
TRAF4-209ENST00000473421 ACSL1P33121 698 aa13.27□□□□□ -0.29
TRAF4-209ENST00000473421 MATKP42679 507 aa13.27□□□□□ -0.29
TRAF4-209ENST00000473421 NASPP49321 788 aaPredicted RBP13.27□□□□□ -0.29
TRAF4-209ENST00000473421 CCDC157Q569K6 752 aa13.27□□□□□ -0.29
TRAF4-209ENST00000473421 CNNM4Q6P4Q7 775 aa13.27□□□□□ -0.29
TRAF4-209ENST00000473421 C12orf56Q8IXR9 622 aa13.27□□□□□ -0.29
TRAF4-209ENST00000473421 CADM4Q8NFZ8 388 aa13.27□□□□□ -0.29
TRAF4-209ENST00000473421 ADAM32Q8TC27 787 aa13.27□□□□□ -0.29
TRAF4-209ENST00000473421 SIPA1Q96FS4 1042 aa13.27□□□□□ -0.29
TRAF4-209ENST00000473421 HNRNPABQ99729 332 aaKnown RBP13.27□□□□□ -0.29
TRAF4-209ENST00000473421 C7orf25Q9BPX7 421 aa13.27□□□□□ -0.29
TRAF4-209ENST00000473421 ZDHHC5Q9C0B5 715 aa13.27□□□□□ -0.29
TRAF4-209ENST00000473421 FBXO44Q9H4M3 255 aa13.27□□□□□ -0.29
TRAF4-209ENST00000473421 DMAC2Q9NW81 257 aa13.27□□□□□ -0.29
TRAF4-209ENST00000473421 MORC2Q9Y6X9 1032 aaPredicted RBP13.27□□□□□ -0.29
TRAF4-209ENST00000473421 HELZ2Q9BYK8 2649 aaKnown RBP13.27□□□□□ -0.29
TRAF4-209ENST00000473421 CBX4O00257 560 aa13.26□□□□□ -0.29
TRAF4-209ENST00000473421 CLSTN1O94985 981 aa13.26□□□□□ -0.29
TRAF4-209ENST00000473421 FAM200BP0CF97 657 aa13.26□□□□□ -0.29
TRAF4-209ENST00000473421 ZNF883P0CG24 379 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms