RNA–Protein interactions for RNA: ENST00000473405.1

CCDC88B-206, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best)

Gene CCDC88B, Length 783 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-206ENST00000473405 WASP42768 502 aa19.72■□□□□ 0.75
CCDC88B-206ENST00000473405 TKTL1P51854 596 aa19.72■□□□□ 0.75
CCDC88B-206ENST00000473405 BCAT1P54687 386 aa19.72■□□□□ 0.75
CCDC88B-206ENST00000473405 PDE4CQ08493 712 aa19.72■□□□□ 0.75
CCDC88B-206ENST00000473405 PM20D1Q6GTS8 502 aa19.72■□□□□ 0.75
CCDC88B-206ENST00000473405 NUDT18Q6ZVK8 323 aa19.72■□□□□ 0.75
CCDC88B-206ENST00000473405 SPACA7Q96KW9 195 aa19.72■□□□□ 0.75
CCDC88B-206ENST00000473405 EDEM2Q9BV94 578 aa19.72■□□□□ 0.75
CCDC88B-206ENST00000473405 PLK2Q9NYY3 685 aa19.72■□□□□ 0.75
CCDC88B-206ENST00000473405 FBXO10Q9UK96 956 aa19.72■□□□□ 0.75
CCDC88B-206ENST00000473405 MAN1B1Q9UKM7 699 aa19.72■□□□□ 0.75
CCDC88B-206ENST00000473405 CHD6Q8TD26 2715 aa19.72■□□□□ 0.75
CCDC88B-206ENST00000473405 XPO1O14980 1071 aaKnown RBP19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 ZBED1O96006 694 aa19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 PENKP01210 267 aaPredicted RBP19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 HMBSP08397 361 aa19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 CORO1AP31146 461 aaKnown RBP19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 PTGER3P43115 390 aa19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 FMO5P49326 533 aa19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 DHPSP49366 369 aaPredicted RBP19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 DGKGP49619 791 aa19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 YWHAGP61981 247 aaKnown RBP eCLIP19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 COG7P83436 770 aa19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 SGO2Q562F6 1265 aa19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 FYB2Q5VWT5 728 aa19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 RNF43Q68DV7 783 aa19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 ISM2Q6H9L7 571 aa19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 ELOA2Q8IYF1 753 aaPredicted RBP19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 ARHGAP18Q8N392 663 aa19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 NDRG1Q92597 394 aaKnown RBP19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 DHTKD1Q96HY7 919 aaPredicted RBP19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 GABRG3Q99928 467 aa19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 ULBP1Q9BZM6 244 aa19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 MARCH2Q9P0N8 246 aa19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 CALCOCO1Q9P1Z2 691 aa19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 HOOK1Q9UJC3 728 aaKnown RBP19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 AGO1Q9UL18 857 aaKnown RBP19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 CIZ1Q9ULV3 898 aaPredicted RBP19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 CKAP5Q14008 2032 aa19.71■□□□□ 0.75
CCDC88B-206ENST00000473405 MUC22E2RYF6 1773 aaPredicted RBP19.7■□□□□ 0.74
CCDC88B-206ENST00000473405 SPEGQ15772 3267 aa19.7■□□□□ 0.74
CCDC88B-206ENST00000473405 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.7■□□□□ 0.74
CCDC88B-206ENST00000473405 O00370 1275 aa19.7■□□□□ 0.74
CCDC88B-206ENST00000473405 SLC8A3P57103 927 aa19.7■□□□□ 0.74
CCDC88B-206ENST00000473405 BST2Q10589 180 aaKnown RBP19.7■□□□□ 0.74
CCDC88B-206ENST00000473405 LRMPQ12912 555 aa19.7■□□□□ 0.74
CCDC88B-206ENST00000473405 KIAA1211LQ6NV74 962 aa19.7■□□□□ 0.74
CCDC88B-206ENST00000473405 TTI2Q6NXR4 508 aa19.7■□□□□ 0.74
CCDC88B-206ENST00000473405 LPCAT2Q7L5N7 544 aa19.7■□□□□ 0.74
CCDC88B-206ENST00000473405 TMEFF1Q8IYR6 380 aa19.7■□□□□ 0.74
CCDC88B-206ENST00000473405 CHPFQ8IZ52 775 aa19.7■□□□□ 0.74
CCDC88B-206ENST00000473405 CEP63Q96MT8 703 aa19.7■□□□□ 0.74
CCDC88B-206ENST00000473405 CNTNAP3BQ96NU0 1288 aa19.7■□□□□ 0.74
CCDC88B-206ENST00000473405 LSM14BQ9BX40 385 aaKnown RBP19.7■□□□□ 0.74
CCDC88B-206ENST00000473405 CNTNAP3Q9BZ76 1288 aa19.7■□□□□ 0.74
CCDC88B-206ENST00000473405 METTL14Q9HCE5 456 aaKnown RBP19.7■□□□□ 0.74
CCDC88B-206ENST00000473405 ZNF510Q9Y2H8 683 aa19.7■□□□□ 0.74
CCDC88B-206ENST00000473405 CFAP47Q6ZTR5 3102 aa19.7■□□□□ 0.74
CCDC88B-206ENST00000473405 ADAMTS9Q9P2N4 1935 aa19.69■□□□□ 0.74
CCDC88B-206ENST00000473405 CD19P15391 556 aa19.69■□□□□ 0.74
CCDC88B-206ENST00000473405 NDUFV2P19404 249 aa19.69■□□□□ 0.74
CCDC88B-206ENST00000473405 KCNA4P22459 653 aa19.69■□□□□ 0.74
CCDC88B-206ENST00000473405 TBXAS1P24557 533 aaPredicted RBP19.69■□□□□ 0.74
CCDC88B-206ENST00000473405 YWHAEP62258 255 aaKnown RBP19.69■□□□□ 0.74
CCDC88B-206ENST00000473405 ADIGQ0VDE8 80 aa19.69■□□□□ 0.74
CCDC88B-206ENST00000473405 STIM1Q13586 685 aa19.69■□□□□ 0.74
CCDC88B-206ENST00000473405 PKDCCQ504Y2 493 aa19.69■□□□□ 0.74
CCDC88B-206ENST00000473405 RSRC2Q7L4I2 434 aaKnown RBP19.69■□□□□ 0.74
CCDC88B-206ENST00000473405 ARMCX6Q7L4S7 300 aa19.69■□□□□ 0.74
CCDC88B-206ENST00000473405 FAM217AQ8IXS0 508 aa19.69■□□□□ 0.74
CCDC88B-206ENST00000473405 PGBD3Q8N328 593 aa19.69■□□□□ 0.74
CCDC88B-206ENST00000473405 ERLEC1Q96DZ1 483 aa19.69■□□□□ 0.74
CCDC88B-206ENST00000473405 DCLK3Q9C098 648 aa19.69■□□□□ 0.74
CCDC88B-206ENST00000473405 CACNA2D2Q9NY47 1150 aa19.69■□□□□ 0.74
CCDC88B-206ENST00000473405 SLC27A6Q9Y2P4 619 aa19.69■□□□□ 0.74
CCDC88B-206ENST00000473405 ASCC3Q8N3C0 2202 aaKnown RBP19.69■□□□□ 0.74
CCDC88B-206ENST00000473405 PCDH15Q96QU1 1955 aa19.68■□□□□ 0.74
CCDC88B-206ENST00000473405 PPP1R3GB7ZBB8 358 aa19.68■□□□□ 0.74
CCDC88B-206ENST00000473405 KHNYNO15037 678 aaKnown RBP19.68■□□□□ 0.74
CCDC88B-206ENST00000473405 PMM2O15305 246 aa19.68■□□□□ 0.74
CCDC88B-206ENST00000473405 MAP3K13O43283 966 aa19.68■□□□□ 0.74
CCDC88B-206ENST00000473405 MFAP3P55082 362 aa19.68■□□□□ 0.74
CCDC88B-206ENST00000473405 SPDYCQ5MJ68 293 aa19.68■□□□□ 0.74
CCDC88B-206ENST00000473405 DENND1CQ8IV53 801 aa19.68■□□□□ 0.74
CCDC88B-206ENST00000473405 LMO3Q8TAP4 145 aa19.68■□□□□ 0.74
CCDC88B-206ENST00000473405 UBA3Q8TBC4 463 aa19.68■□□□□ 0.74
CCDC88B-206ENST00000473405 IPO4Q8TEX9 1081 aaKnown RBP19.68■□□□□ 0.74
CCDC88B-206ENST00000473405 TFAP2BQ92481 460 aa19.68■□□□□ 0.74
CCDC88B-206ENST00000473405 PIGKQ92643 395 aa19.68■□□□□ 0.74
CCDC88B-206ENST00000473405 KAT5Q92993 513 aa19.68■□□□□ 0.74
CCDC88B-206ENST00000473405 ZSWIM1Q9BR11 485 aa19.68■□□□□ 0.74
CCDC88B-206ENST00000473405 TMEM74BQ9NUR3 256 aa19.68■□□□□ 0.74
CCDC88B-206ENST00000473405 HESX1Q9UBX0 185 aa19.68■□□□□ 0.74
CCDC88B-206ENST00000473405 STRIP2Q9ULQ0 834 aa19.68■□□□□ 0.74
CCDC88B-206ENST00000473405 RAD54BQ9Y620 910 aa19.68■□□□□ 0.74
CCDC88B-206ENST00000473405 CACNA1EQ15878 2313 aa19.67■□□□□ 0.74
CCDC88B-206ENST00000473405 SLC12A8A0AV02 714 aa19.67■□□□□ 0.74
CCDC88B-206ENST00000473405 YJEFN3A6XGL0 299 aa19.67■□□□□ 0.74
CCDC88B-206ENST00000473405 C4orf47A7E2U8 309 aa19.67■□□□□ 0.74
CCDC88B-206ENST00000473405 E7ENQ6 273 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms