RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 RIPOR3Q96MK2 946 aa13.09□□□□□ -0.31
TRAPPC12-217ENST00000473348 SLC22A12Q96S37 553 aa13.09□□□□□ -0.31
TRAPPC12-217ENST00000473348 ADAM33Q9BZ11 813 aa13.09□□□□□ -0.31
TRAPPC12-217ENST00000473348 GOLPH3Q9H4A6 298 aa13.09□□□□□ -0.31
TRAPPC12-217ENST00000473348 TASP1Q9H6P5 420 aa13.09□□□□□ -0.31
TRAPPC12-217ENST00000473348 UBE2ZQ9H832 354 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC12-217ENST00000473348 WDR6Q9NNW5 1121 aaKnown RBP13.09□□□□□ -0.31
TRAPPC12-217ENST00000473348 DDIT4Q9NX09 232 aa13.09□□□□□ -0.31
TRAPPC12-217ENST00000473348 MARCH2Q9P0N8 246 aa13.09□□□□□ -0.31
TRAPPC12-217ENST00000473348 COX16Q9P0S2 106 aa13.09□□□□□ -0.31
TRAPPC12-217ENST00000473348 SFMBT1Q9UHJ3 866 aa13.09□□□□□ -0.31
TRAPPC12-217ENST00000473348 CD207Q9UJ71 328 aa13.09□□□□□ -0.31
TRAPPC12-217ENST00000473348 USTQ9Y2C2 406 aa13.09□□□□□ -0.31
TRAPPC12-217ENST00000473348 MYOFQ9NZM1 2061 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 MIA3Q5JRA6 1907 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 TRAV19A0A0A6YYK7 116 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 H3BQ06 376 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 IRAK2O43187 625 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 MSI1O43347 362 aaKnown RBP13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 PALMO75781 387 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 RNF8O76064 485 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 OLFM2O95897 454 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 IGLV3-25P01717 112 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 CKMP06732 381 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 MBL2P11226 248 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 PFKLP17858 780 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 KCNA5P22460 613 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 RDXP35241 583 aaKnown RBP13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 DEUP1Q05D60 604 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 NME3Q13232 169 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 RAB6CQ53S08 254 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 ATAT1Q5SQI0 421 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 SH3PXD2AQ5TCZ1 1133 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 DAB2IPQ5VWQ8 1189 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 KLHDC10Q6PID8 442 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 STRADAQ7RTN6 431 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 DAAM2Q86T65 1068 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 ZSCAN30Q86W11 494 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 CPNE8Q86YQ8 564 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 MIB1Q86YT6 1006 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 ARL14EPQ8N8R7 260 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 CENPIQ92674 756 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 SERPINB11Q96P15 392 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 ALS2CR12Q96Q35 445 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 IRX2Q9BZI1 471 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 RNF38Q9H0F5 515 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 RAB6CQ9H0N0 254 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 SLITRK6Q9H5Y7 841 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 CALCOCO1Q9P1Z2 691 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 DNMT3LQ9UJW3 386 aa13.08□□□□□ -0.32
TRAPPC12-217ENST00000473348 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 SLC12A8A0AV02 714 aa13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 LRCH4O75427 683 aa13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 ENDOD1O94919 500 aa13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 HDCP19113 662 aa13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 GBP1P32455 592 aa13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 ATXN1P54253 815 aaKnown RBP13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 HDAC4P56524 1084 aa13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 NNTQ13423 1086 aa13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 ACAP1Q15027 740 aa13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 SND1Q7KZF4 910 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 BNIPLQ7Z465 357 aa13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 NPAS3Q8IXF0 933 aa13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 SYCE1Q8N0S2 351 aa13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 LRRC57Q8N9N7 239 aa13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 PGAP3Q96FM1 320 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 NECTIN4Q96NY8 510 aa13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 CYP2S1Q96SQ9 504 aa13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 SLC46A2Q9BY10 475 aa13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 PIGVQ9NUD9 493 aa13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 ZMYM5Q9UJ78 669 aa13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 USP15Q9Y4E8 981 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 HYOU1Q9Y4L1 999 aa13.07□□□□□ -0.32
TRAPPC12-217ENST00000473348 TICRRQ7Z2Z1 1910 aa13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 SOBPA7XYQ1 873 aa13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 SPOPO43791 374 aa13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 KIF5CO60282 957 aa13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 F9P00740 461 aa13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 COMTP21964 271 aa13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 MSNP26038 577 aaKnown RBP13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 AVPR1AP37288 418 aa13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 SSR1P43307 286 aaKnown RBP13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 TBX4P57082 545 aa13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 SLC7A9P82251 487 aa13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 SMAD4Q13485 552 aaKnown RBP13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 CBX2Q14781 532 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 TRIP4Q15650 581 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 CC2D1AQ6P1N0 951 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 FAM131BQ86XD5 332 aa13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 CMTM8Q8IZV2 173 aa13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 ARFGAP1Q8N6T3 406 aa13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 TRIM58Q8NG06 486 aa13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 NCAPGQ9BPX3 1015 aa13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 POMKQ9H5K3 350 aa13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 SMPD4Q9NXE4 827 aa13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 TLR6Q9Y2C9 796 aa13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 HBS1LQ9Y450 684 aaKnown RBP13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 CPQQ9Y646 472 aa13.06□□□□□ -0.32
TRAPPC12-217ENST00000473348 ALG6Q9Y672 507 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms