RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 HSF4Q9ULV5 492 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 NAALADL1Q9UQQ1 740 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 WDR37Q9Y2I8 494 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 PLCH1Q4KWH8 1693 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 GOLGA6L10A0A0M3HER8 536 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 hCG_1809904A0A1W2PP81 198 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 A0A1W2PPE2 198 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 A0A1W2PR64 198 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 A0A1W2PRV1 198 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 CTAGE15A4D2H0 777 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 LRRIQ4A6NIV6 560 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 KCNK3O14649 394 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 WDR46O15213 610 aaKnown RBP6.31□□□□□ -1.4
RTF1-203ENST00000473214 MAGEB3O15480 346 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 SLC25A17O43808 307 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 BCAS2O75934 225 aaPredicted RBP6.31□□□□□ -1.4
RTF1-203ENST00000473214 PRKCBP05771 671 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 RHOXF2BP0C7M4 288 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 FAM87AP0C7U9 286 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 CTAGE8P0CG41 777 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 COL6A2P12110 1019 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 LCP1P13796 627 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 TM4SF1P30408 202 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 GGT5P36269 586 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 PSMB10P40306 273 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 ACAA2P42765 397 aaKnown RBP6.31□□□□□ -1.4
RTF1-203ENST00000473214 HARS2P49590 506 aaKnown RBP6.31□□□□□ -1.4
RTF1-203ENST00000473214 ACTR1AP61163 376 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 RPP30P78346 268 aaKnown RBP6.31□□□□□ -1.4
RTF1-203ENST00000473214 NKX6-1P78426 367 aaPredicted RBP6.31□□□□□ -1.4
RTF1-203ENST00000473214 KCNJ10P78508 379 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 LACTBP83111 547 aaPredicted RBP6.31□□□□□ -1.4
RTF1-203ENST00000473214 CDK17Q00537 523 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 NOGQ13253 232 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 RCN2Q14257 317 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 KIF4BQ2VIQ3 1234 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 KRTAP19-4Q3LI73 84 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 PITRM1Q5JRX3 1037 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 LCE5AQ5TCM9 118 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 ANGEL2Q5VTE6 544 aaKnown RBP6.31□□□□□ -1.4
RTF1-203ENST00000473214 MFSD5Q6N075 450 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 ISLR2Q6UXK2 745 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 RABEPKQ7Z6M1 372 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 ADGRG6Q86SQ4 1221 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 CTAGE6Q86UF2 777 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 FAM160B2Q86V87 743 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 UNC5CLQ8IV45 518 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 CTAGE4Q8IX94 777 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 ULK2Q8IYT8 1036 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 TDRD5Q8NAT2 981 aaKnown RBP6.31□□□□□ -1.4
RTF1-203ENST00000473214 OR56B2PQ8NGI1 322 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 OR1N1Q8NGS0 311 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 OR6Y1Q8NGX8 325 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 SCAMP5Q8TAC9 235 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 FIBINQ8TAL6 211 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 SYTL5Q8TDW5 730 aaPredicted RBP6.31□□□□□ -1.4
RTF1-203ENST00000473214 RABGGTAQ92696 567 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 CYFIP2Q96F07 1278 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 APOPT1Q96IL0 206 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 LENG8Q96PV6 779 aaPredicted RBP6.31□□□□□ -1.4
RTF1-203ENST00000473214 TRAPPC9Q96Q05 1148 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 CTAGE1Q96RT6 745 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 TCF25Q9BQ70 676 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 RHOXF2Q9BQY4 288 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 INTS2Q9H0H0 1204 aaKnown RBP6.31□□□□□ -1.4
RTF1-203ENST00000473214 DPH5Q9H2P9 285 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 SMARCAD1Q9H4L7 1026 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 CCDC86Q9H6F5 360 aaKnown RBP6.31□□□□□ -1.4
RTF1-203ENST00000473214 RC3H2Q9HBD1 1191 aaKnown RBP6.31□□□□□ -1.4
RTF1-203ENST00000473214 TMEM8AQ9HCN3 771 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 NRIP3Q9NQ35 241 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 GPRC5CQ9NQ84 441 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 PFDN4Q9NQP4 134 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 HOMER3Q9NSC5 361 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 HCFC1R1Q9NWW0 138 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 DDX43Q9NXZ2 648 aaKnown RBP6.31□□□□□ -1.4
RTF1-203ENST00000473214 NDUFAF4Q9P032 175 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 COX16Q9P0S2 106 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 HMG20BQ9P0W2 317 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 FETUBQ9UGM5 382 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 FAM153AQ9UHL3 310 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 TMEFF2Q9UIK5 374 aaPredicted RBP6.31□□□□□ -1.4
RTF1-203ENST00000473214 GRID1Q9ULK0 1009 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 HS3ST4Q9Y661 456 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 SLC30A1Q9Y6M5 507 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 USP32Q8NFA0 1604 aa6.31□□□□□ -1.4
RTF1-203ENST00000473214 RGPD1P0DJD0 1748 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 NUP188Q5SRE5 1749 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 ZNF804BA4D1E1 1349 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 TTC21BQ7Z4L5 1316 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 TRAV34A0A0B4J273 112 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 ZNF263O14978 683 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 TMPRSS2O15393 492 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 NMT2O60551 498 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 KRT38O76015 456 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 FGFR1OPO95684 399 aaKnown RBP6.3□□□□□ -1.4
RTF1-203ENST00000473214 F9P00740 461 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 TPM1P09493 284 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 CKBP12277 381 aa6.3□□□□□ -1.4
RTF1-203ENST00000473214 XRCC6P12956 609 aaKnown RBP eCLIP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms