RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 SMG9Q9H0W8 520 aaKnown RBP9.54□□□□□ -0.88
SMC4-214ENST00000472991 LHX5Q9H2C1 402 aa9.54□□□□□ -0.88
SMC4-214ENST00000472991 CD320Q9NPF0 282 aa9.54□□□□□ -0.88
SMC4-214ENST00000472991 TLR8Q9NR97 1041 aaKnown RBP9.54□□□□□ -0.88
SMC4-214ENST00000472991 SEPT11Q9NVA2 429 aaKnown RBP9.54□□□□□ -0.88
SMC4-214ENST00000472991 OSER1Q9NX31 292 aa9.54□□□□□ -0.88
SMC4-214ENST00000472991 ZMYM5Q9UJ78 669 aa9.54□□□□□ -0.88
SMC4-214ENST00000472991 NAGPAQ9UK23 515 aa9.54□□□□□ -0.88
SMC4-214ENST00000472991 LUC7L2Q9Y383 392 aaKnown RBP9.54□□□□□ -0.88
SMC4-214ENST00000472991 TRIOO75962 3097 aa9.54□□□□□ -0.88
SMC4-214ENST00000472991 KIAA1549LQ6ZVL6 1849 aa9.54□□□□□ -0.88
SMC4-214ENST00000472991 A0A0C4DFX4 3053 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 TRAV19A0A0A6YYK7 116 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 YJEFN3A6XGL0 299 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 E7ENQ6 273 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 PAPSS1O43252 624 aaPredicted RBP9.53□□□□□ -0.88
SMC4-214ENST00000472991 FBXO21O94952 628 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 LSM8O95777 96 aaKnown RBP9.53□□□□□ -0.88
SMC4-214ENST00000472991 ERBB2P04626 1255 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 CYP1A1P04798 512 aaPredicted RBP9.53□□□□□ -0.88
SMC4-214ENST00000472991 TPM1P09493 284 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 SKILP12757 684 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 RARGP13631 454 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 AVPR1AP37288 418 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 VIPR2P41587 438 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 PRKCIP41743 596 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 ACADSBP45954 432 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 KLHL30Q0D2K2 578 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 SNX30Q5VWJ9 437 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 NAA35Q5VZE5 725 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 PM20D1Q6GTS8 502 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 PARM1Q6UWI2 310 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 TRIM72Q6ZMU5 477 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 HFE2Q6ZVN8 426 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 MTSS1LQ765P7 747 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 ARID3BQ8IVW6 561 aaPredicted RBP9.53□□□□□ -0.88
SMC4-214ENST00000472991 CMTM8Q8IZV2 173 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 SCML4Q8N228 414 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 OLIG1Q8TAK6 271 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 IPO4Q8TEX9 1081 aaKnown RBP9.53□□□□□ -0.88
SMC4-214ENST00000472991 SMARCD2Q92925 531 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 PPP1R13BQ96KQ4 1090 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 CYP2S1Q96SQ9 504 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 PCDHB18PQ96TA0 734 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 AGPAT1Q99943 283 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 SYT11Q9BT88 431 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 NUCKS1Q9H1E3 243 aaKnown RBP9.53□□□□□ -0.88
SMC4-214ENST00000472991 HAUS4Q9H6D7 363 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 CCSER2Q9H7U1 834 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 CNGB3Q9NQW8 809 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.53□□□□□ -0.88
SMC4-214ENST00000472991 AIPL1Q9NZN9 384 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 NUDT5Q9UKK9 219 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 NUMBLQ9Y6R0 609 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 BDP1A6H8Y1 2624 aa9.53□□□□□ -0.88
SMC4-214ENST00000472991 ANHXE9PGG2 379 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 MDM4O15151 490 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 COCHO43405 550 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 TLR5O60602 858 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 MFAP3LO75121 409 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 OLFM2O95897 454 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 LTFP02788 710 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 MBL2P11226 248 aaPredicted RBP9.52□□□□□ -0.89
SMC4-214ENST00000472991 RALAP11233 206 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 PFKLP17858 780 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 HDCP19113 662 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 TNFAIP3P21580 790 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 TUBP50607 506 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 ADKP55263 362 aaKnown RBP9.52□□□□□ -0.89
SMC4-214ENST00000472991 YWHAGP61981 247 aaKnown RBP eCLIP9.52□□□□□ -0.891e-117■■■■■ 400.8
SMC4-214ENST00000472991 TBX2Q13207 712 aaPredicted RBP9.52□□□□□ -0.89
SMC4-214ENST00000472991 CLEC16AQ2KHT3 1053 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 C2CD6Q53TS8 623 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 HECTD3Q5T447 861 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 BTBD8Q5XKL5 378 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 HGSNATQ68CP4 663 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 TANGO2Q6ICL3 276 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 FAM183BPQ6ZVS7 135 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 ZNF571Q7Z3V5 609 aaPredicted RBP9.52□□□□□ -0.89
SMC4-214ENST00000472991 TMEM110Q86TL2 294 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 RNF135Q8IUD6 432 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 ARHGAP18Q8N392 663 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 MSANTD4Q8NCY6 345 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 SLC30A5Q8TAD4 765 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 CPA5Q8WXQ8 436 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 IRGQQ8WZA9 623 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 SYN2Q92777 582 aaPredicted RBP9.52□□□□□ -0.89
SMC4-214ENST00000472991 USP13Q92995 863 aaPredicted RBP9.52□□□□□ -0.89
SMC4-214ENST00000472991 FAM149B1Q96BN6 582 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 RSPRY1Q96DX4 576 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 PIWIL1Q96J94 861 aaKnown RBP9.52□□□□□ -0.89
SMC4-214ENST00000472991 C11orf70Q9BRQ4 267 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 RPP25Q9BUL9 199 aaKnown RBP9.52□□□□□ -0.89
SMC4-214ENST00000472991 PLA2G2FQ9BZM2 168 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 RNF38Q9H0F5 515 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 SYNCQ9H7C4 482 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 KCNK12Q9HB15 430 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 TRPV4Q9HBA0 871 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 ZFP14Q9HCL3 533 aa9.52□□□□□ -0.89
SMC4-214ENST00000472991 CLIC5Q9NZA1 410 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms