RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 GOLGA7BQ2TAP0 167 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 SGO2Q562F6 1265 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 SPDYCQ5MJ68 293 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 EGFLAMQ63HQ2 1017 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 ISM2Q6H9L7 571 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 FOXR2Q6PJQ5 311 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 TOGARAM2Q6ZUX3 1019 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 FRMD1Q8N878 549 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 SPACA7Q96KW9 195 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 ACOX2Q99424 681 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 GABRG3Q99928 467 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 CD248Q9HCU0 757 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 MARCH2Q9P0N8 246 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 MBD1Q9UIS9 605 aaPredicted RBP16.04■□□□□ 0.16
VTI1A-203ENST00000472892 RASAL2Q9UJF2 1139 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 TSPAN16Q9UKR8 245 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 SPTBN2O15020 2390 aa16.04■□□□□ 0.16
VTI1A-203ENST00000472892 PPP1R3GB7ZBB8 358 aa16.03■□□□□ 0.16
VTI1A-203ENST00000472892 KHNYNO15037 678 aaKnown RBP16.03■□□□□ 0.16
VTI1A-203ENST00000472892 MAP3K13O43283 966 aa16.03■□□□□ 0.16
VTI1A-203ENST00000472892 PENKP01210 267 aaPredicted RBP16.03■□□□□ 0.16
VTI1A-203ENST00000472892 VDRP11473 427 aa16.03■□□□□ 0.16
VTI1A-203ENST00000472892 HOXB2P14652 356 aa16.03■□□□□ 0.16
VTI1A-203ENST00000472892 BMP6P22004 513 aa16.03■□□□□ 0.16
VTI1A-203ENST00000472892 DHPSP49366 369 aaPredicted RBP16.03■□□□□ 0.16
VTI1A-203ENST00000472892 BCAT1P54687 386 aa16.03■□□□□ 0.16
VTI1A-203ENST00000472892 LRMPQ12912 555 aa16.03■□□□□ 0.16
VTI1A-203ENST00000472892 FYB2Q5VWT5 728 aa16.03■□□□□ 0.16
VTI1A-203ENST00000472892 RNF43Q68DV7 783 aa16.03■□□□□ 0.16
VTI1A-203ENST00000472892 SDE2Q6IQ49 451 aa16.03■□□□□ 0.16
VTI1A-203ENST00000472892 TTI2Q6NXR4 508 aa16.03■□□□□ 0.16
VTI1A-203ENST00000472892 LPCAT2Q7L5N7 544 aa16.03■□□□□ 0.16
VTI1A-203ENST00000472892 BHLHA9Q7RTU4 235 aa16.03■□□□□ 0.16
VTI1A-203ENST00000472892 PGBD3Q8N328 593 aa16.03■□□□□ 0.16
VTI1A-203ENST00000472892 KCTD13Q8WZ19 329 aa16.03■□□□□ 0.16
VTI1A-203ENST00000472892 LSM14BQ9BX40 385 aaKnown RBP16.03■□□□□ 0.16
VTI1A-203ENST00000472892 ULBP1Q9BZM6 244 aa16.03■□□□□ 0.16
VTI1A-203ENST00000472892 PLK2Q9NYY3 685 aa16.03■□□□□ 0.16
VTI1A-203ENST00000472892 HESX1Q9UBX0 185 aa16.03■□□□□ 0.16
VTI1A-203ENST00000472892 AGO1Q9UL18 857 aaKnown RBP16.03■□□□□ 0.16
VTI1A-203ENST00000472892 STRIP2Q9ULQ0 834 aa16.03■□□□□ 0.16
VTI1A-203ENST00000472892 SLC27A6Q9Y2P4 619 aa16.03■□□□□ 0.16
VTI1A-203ENST00000472892 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.02■□□□□ 0.16
VTI1A-203ENST00000472892 O00370 1275 aa16.02■□□□□ 0.16
VTI1A-203ENST00000472892 GFRA2O00451 464 aa16.02■□□□□ 0.16
VTI1A-203ENST00000472892 HMBSP08397 361 aa16.02■□□□□ 0.16
VTI1A-203ENST00000472892 CD19P15391 556 aa16.02■□□□□ 0.16
VTI1A-203ENST00000472892 CORO1AP31146 461 aaKnown RBP16.02■□□□□ 0.16
VTI1A-203ENST00000472892 WASP42768 502 aa16.02■□□□□ 0.16
VTI1A-203ENST00000472892 BST2Q10589 180 aaKnown RBP16.02■□□□□ 0.16
VTI1A-203ENST00000472892 PKDCCQ504Y2 493 aa16.02■□□□□ 0.16
VTI1A-203ENST00000472892 LCLAT1Q6UWP7 414 aa16.02■□□□□ 0.16
VTI1A-203ENST00000472892 RSRC2Q7L4I2 434 aaKnown RBP16.02■□□□□ 0.16
VTI1A-203ENST00000472892 CYP2U1Q7Z449 544 aa16.02■□□□□ 0.16
VTI1A-203ENST00000472892 DENND1CQ8IV53 801 aa16.02■□□□□ 0.16
VTI1A-203ENST00000472892 TMEFF1Q8IYR6 380 aa16.02■□□□□ 0.16
VTI1A-203ENST00000472892 CHPFQ8IZ52 775 aa16.02■□□□□ 0.16
VTI1A-203ENST00000472892 SCML4Q8N228 414 aa16.02■□□□□ 0.16
VTI1A-203ENST00000472892 CPXM2Q8N436 756 aa16.02■□□□□ 0.16
VTI1A-203ENST00000472892 LMO3Q8TAP4 145 aa16.02■□□□□ 0.16
VTI1A-203ENST00000472892 UBA3Q8TBC4 463 aa16.02■□□□□ 0.16
VTI1A-203ENST00000472892 IPO4Q8TEX9 1081 aaKnown RBP16.02■□□□□ 0.16
VTI1A-203ENST00000472892 NDRG1Q92597 394 aaKnown RBP16.02■□□□□ 0.16
VTI1A-203ENST00000472892 BHMTQ93088 406 aa16.02■□□□□ 0.16
VTI1A-203ENST00000472892 EDEM2Q9BV94 578 aa16.02■□□□□ 0.16
VTI1A-203ENST00000472892 LRRC4Q9HBW1 653 aa16.02■□□□□ 0.16
VTI1A-203ENST00000472892 CIZ1Q9ULV3 898 aaPredicted RBP16.02■□□□□ 0.16
VTI1A-203ENST00000472892 MYO18AQ92614 2054 aaKnown RBP16.01■□□□□ 0.15
VTI1A-203ENST00000472892 SLC12A8A0AV02 714 aa16.01■□□□□ 0.15
VTI1A-203ENST00000472892 LNP1A1A4G5 178 aa16.01■□□□□ 0.15
VTI1A-203ENST00000472892 PATE3B3GLJ2 98 aa16.01■□□□□ 0.15
VTI1A-203ENST00000472892 P4HA2O15460 535 aa16.01■□□□□ 0.15
VTI1A-203ENST00000472892 PAEPP09466 180 aa16.01■□□□□ 0.15
VTI1A-203ENST00000472892 PTGER3P43115 390 aa16.01■□□□□ 0.15
VTI1A-203ENST00000472892 IRX4P78413 519 aa16.01■□□□□ 0.15
VTI1A-203ENST00000472892 MORC3Q14149 939 aa16.01■□□□□ 0.15
VTI1A-203ENST00000472892 TRIP4Q15650 581 aaPredicted RBP16.01■□□□□ 0.15
VTI1A-203ENST00000472892 CCDC40Q4G0X9 1142 aa16.01■□□□□ 0.15
VTI1A-203ENST00000472892 KIAA1211LQ6NV74 962 aa16.01■□□□□ 0.15
VTI1A-203ENST00000472892 FAM217AQ8IXS0 508 aa16.01■□□□□ 0.15
VTI1A-203ENST00000472892 TFAP2BQ92481 460 aa16.01■□□□□ 0.15
VTI1A-203ENST00000472892 PIGKQ92643 395 aa16.01■□□□□ 0.15
VTI1A-203ENST00000472892 PLD4Q96BZ4 506 aa16.01■□□□□ 0.15
VTI1A-203ENST00000472892 NT5C1BQ96P26 610 aa16.01■□□□□ 0.15
VTI1A-203ENST00000472892 OLA1Q9NTK5 396 aaKnown RBP16.01■□□□□ 0.15
VTI1A-203ENST00000472892 LAMA1P25391 3075 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 BICDL2A1A5D9 508 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 YJEFN3A6XGL0 299 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 C4orf47A7E2U8 309 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 E7ENQ6 273 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 RNF225M0QZC1 329 aaPredicted RBP16■□□□□ 0.15
VTI1A-203ENST00000472892 ZBTB24O43167 697 aaPredicted RBP16■□□□□ 0.15
VTI1A-203ENST00000472892 SETSIPP0DME0 302 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 MFAP3P55082 362 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 ADIGQ0VDE8 80 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 CETN1Q12798 172 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 CNGA2Q16280 664 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 BSPRYQ5W0U4 402 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 TMEM270Q6UE05 265 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 SLC36A4Q6YBV0 504 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms