RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 CYP24A1Q07973 514 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 ALCAMQ13740 583 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 PSMD6Q15008 389 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 SUZ12Q15022 739 aaKnown RBP9.86□□□□□ -0.83
VCL-204ENST00000472585 SURF1Q15526 300 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 IL27RAQ6UWB1 636 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 TPGS1Q6ZTW0 290 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 FAM35AQ86V20 835 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 DDX42Q86XP3 938 aaKnown RBP eCLIP9.86□□□□□ -0.83
VCL-204ENST00000472585 PDILTQ8N807 584 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 C1orf216Q8TAB5 229 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 OVCA2Q8WZ82 227 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 FCRL3Q96P31 734 aaPredicted RBP9.86□□□□□ -0.83
VCL-204ENST00000472585 USP28Q96RU2 1077 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 CGRRF1Q99675 332 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 ELOVL4Q9GZR5 314 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 MKRN2Q9H000 416 aaKnown RBP9.86□□□□□ -0.83
VCL-204ENST00000472585 MIR1-1HGQ9H1L0 117 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 NMUR1Q9HB89 426 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 AGPAT3Q9NRZ7 376 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 DNAJC17Q9NVM6 304 aaKnown RBP9.86□□□□□ -0.83
VCL-204ENST00000472585 WSB2Q9NYS7 404 aaPredicted RBP9.86□□□□□ -0.83
VCL-204ENST00000472585 PLK2Q9NYY3 685 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 HMGXB4Q9UGU5 601 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 FBXO10Q9UK96 956 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 NUDT5Q9UKK9 219 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 CLEC4EQ9ULY5 219 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 SH3BP1Q9Y3L3 701 aa9.86□□□□□ -0.83
VCL-204ENST00000472585 COL6A6A6NMZ7 2263 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 NEDD8-MDP1E9PL57 170 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 KIAA0391O15091 583 aaKnown RBP9.85□□□□□ -0.83
VCL-204ENST00000472585 CACNG3O60359 315 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 CILPO75339 1184 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 DKK1O94907 266 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 RTN3O95197 1032 aaPredicted RBP9.85□□□□□ -0.83
VCL-204ENST00000472585 STAU1O95793 577 aaKnown RBP9.85□□□□□ -0.83
VCL-204ENST00000472585 KLKB1P03952 638 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 CCDC130P13994 396 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 TYRP14679 529 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 TNNI1P19237 187 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 TUBP50607 506 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 CYP2J2P51589 502 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 CFHR1Q03591 330 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 EHHADHQ08426 723 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 SLC39A14Q15043 492 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 GRAMD4Q6IC98 578 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 Q6ZNB5 142 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 DBX2Q6ZNG2 339 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 ACOT1Q86TX2 421 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 CHPFQ8IZ52 775 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 ZCCHC9Q8N567 271 aaKnown RBP9.85□□□□□ -0.83
VCL-204ENST00000472585 C12orf29Q8N999 325 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 PDZD8Q8NEN9 1154 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 BAHD1Q8TBE0 780 aaPredicted RBP9.85□□□□□ -0.83
VCL-204ENST00000472585 SCFD1Q8WVM8 642 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 DNASE2BQ8WZ79 361 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 BHMTQ93088 406 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 TOE1Q96GM8 510 aaKnown RBP9.85□□□□□ -0.83
VCL-204ENST00000472585 PRORYQ9H606 182 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 KBTBD4Q9NVX7 518 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 EHD2Q9NZN4 543 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 MARK1Q9P0L2 795 aa9.85□□□□□ -0.83
VCL-204ENST00000472585 MUC22E2RYF6 1773 aaPredicted RBP9.84□□□□□ -0.83
VCL-204ENST00000472585 TEX51A0A1B0GUA7 166 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 VPS37CA5D8V6 355 aaPredicted RBP9.84□□□□□ -0.83
VCL-204ENST00000472585 TLR5O60602 858 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 AP1G2O75843 785 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 C4BPAP04003 597 aaKnown RBP9.84□□□□□ -0.83
VCL-204ENST00000472585 ACO1P21399 889 aaKnown RBP9.84□□□□□ -0.83
VCL-204ENST00000472585 STAT6P42226 847 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 TNNC1P63316 161 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 CUL4AQ13619 759 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 ENPP2Q13822 863 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 HLA-BQ31612 363 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 FUT11Q495W5 492 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 KIAA1324Q6UXG2 1013 aaKnown RBP9.84□□□□□ -0.83
VCL-204ENST00000472585 CCDC73Q6ZRK6 1079 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 GPR155Q7Z3F1 870 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 SPNS2Q8IVW8 549 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 NELFCDQ8IXH7 590 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 CCDC65Q8IXS2 484 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 RBBP8NLQ8NC74 664 aaPredicted RBP9.84□□□□□ -0.83
VCL-204ENST00000472585 BAP1Q92560 729 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 NXPE2Q96DL1 559 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 TWNKQ96RR1 684 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 BBS2Q9BXC9 721 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 CLMPQ9H6B4 373 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 VRTNQ9H8Y1 702 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 CSNK1G1Q9HCP0 422 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 DMAP1Q9NPF5 467 aaPredicted RBP9.84□□□□□ -0.83
VCL-204ENST00000472585 ITM2CQ9NQX7 267 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 KRT82Q9NSB4 513 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 USP36Q9P275 1121 aaKnown RBP9.84□□□□□ -0.83
VCL-204ENST00000472585 BTBD3Q9Y2F9 522 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 FNDC3AQ9Y2H6 1198 aaKnown RBP9.84□□□□□ -0.83
VCL-204ENST00000472585 R3HCC1Q9Y3T6 440 aaKnown RBP9.84□□□□□ -0.83
VCL-204ENST00000472585 PCDHGB2Q9Y5G2 931 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 MYH10P35580 1976 aa9.84□□□□□ -0.83
VCL-204ENST00000472585 PIEZO2Q9H5I5 2752 aa9.83□□□□□ -0.84
VCL-204ENST00000472585 LRRIQ3A6PVS8 624 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms