RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 ENOSF1Q7L5Y1 443 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 FUKQ8N0W3 1084 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 TMEM151AQ8N4L1 468 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 ARL14EPQ8N8R7 260 aaPredicted RBP9.64□□□□□ -0.87
SMC4-213ENST00000472282 SLC2A14Q8TDB8 520 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 SHC3Q92529 594 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 MRPS31Q92665 395 aaKnown RBP9.64□□□□□ -0.87
SMC4-213ENST00000472282 JAKMIP2Q96AA8 810 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 SMARCD1Q96GM5 515 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 FAM81BQ96LP2 452 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 HEXIM2Q96MH2 286 aaKnown RBP9.64□□□□□ -0.87
SMC4-213ENST00000472282 DNAI2Q9GZS0 605 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 FBRSL1Q9HCM7 1045 aaKnown RBP9.64□□□□□ -0.87
SMC4-213ENST00000472282 TRPC7Q9HCX4 862 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 PLCB1Q9NQ66 1216 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 KRT82Q9NSB4 513 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 FAM207AQ9NSI2 230 aaPredicted RBP9.64□□□□□ -0.87
SMC4-213ENST00000472282 TDP1Q9NUW8 608 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 POLR3BQ9NW08 1133 aaPredicted RBP9.64□□□□□ -0.87
SMC4-213ENST00000472282 PCDHGA2Q9Y5H1 932 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 CFAP54Q96N23 3096 aa9.64□□□□□ -0.87
SMC4-213ENST00000472282 ANTXRLA6NF34 631 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 CHURC1-FNTBB4DL54 471 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 F8VP50 259 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 UCHL3P15374 230 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 BRD2P25440 801 aaKnown RBP9.63□□□□□ -0.87
SMC4-213ENST00000472282 DDX6P26196 483 aaKnown RBP eCLIP9.63□□□□□ -0.87
SMC4-213ENST00000472282 GRIK1P39086 918 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 USP8P40818 1118 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 CXCL12P48061 93 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 FNTBP49356 437 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 CCR3P51677 355 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 ZNF132P52740 706 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 UBASH3AP57075 661 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 POLR2FP61218 127 aaKnown RBP9.63□□□□□ -0.87
SMC4-213ENST00000472282 USP4Q13107 963 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 RUNX3Q13761 415 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 MTF1Q14872 753 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 DRAP1Q14919 205 aaPredicted RBP9.63□□□□□ -0.87
SMC4-213ENST00000472282 ZNF77Q15935 545 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 SGO2Q562F6 1265 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 XP32Q5T750 250 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 VSTM1Q6UX27 236 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 GAS2L3Q86XJ1 694 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 SVOPQ8N4V2 548 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 TTC16Q8NEE8 873 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 NEK11Q8NG66 645 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 ATRIPQ8WXE1 791 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 RUBCNQ92622 972 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 EZH1Q92800 747 aaPredicted RBP9.63□□□□□ -0.87
SMC4-213ENST00000472282 RMDN1Q96DB5 314 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 CYFIP2Q96F07 1278 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 MSANTD3Q96H12 275 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 HINFPQ9BQA5 517 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 NAA15Q9BXJ9 866 aaKnown RBP9.63□□□□□ -0.87
SMC4-213ENST00000472282 EPC1Q9H2F5 836 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 NLRC4Q9NPP4 1024 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 IFNKQ9P0W0 207 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 SMG5Q9UPR3 1016 aaKnown RBP9.63□□□□□ -0.87
SMC4-213ENST00000472282 CNTN6Q9UQ52 1028 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 WNT6Q9Y6F9 365 aa9.63□□□□□ -0.87
SMC4-213ENST00000472282 CEP192Q8TEP8 1941 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 GVINP1Q7Z2Y8 2422 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 SCAMP3O14828 347 aaKnown RBP9.62□□□□□ -0.87
SMC4-213ENST00000472282 EGFP01133 1207 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 CKMP06732 381 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 PAEPP09466 180 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 FAM200BP0CF97 657 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 VDRP11473 427 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 TGM1P22735 817 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 ANXA13P27216 316 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 ID4P47928 161 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 RAB15P59190 212 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 IFRD2Q12894 506 aaPredicted RBP9.62□□□□□ -0.87
SMC4-213ENST00000472282 LRRC32Q14392 662 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 ZNF268Q14587 947 aaPredicted RBP9.62□□□□□ -0.87
SMC4-213ENST00000472282 NR1I3Q14994 352 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 GOLGA7BQ2TAP0 167 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 TMEM196Q5HYL7 178 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 DGKKQ5KSL6 1271 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 ARHGAP17Q68EM7 881 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 HEATR6Q6AI08 1181 aaKnown RBP9.62□□□□□ -0.87
SMC4-213ENST00000472282 CLEC20AQ6ZU45 233 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 VWA5B2Q8N398 1253 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 SPEM1Q8N4L4 309 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 ZMIZ2Q8NF64 920 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 RNF217Q8TC41 542 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 TFAP2BQ92481 460 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 SPATA17Q96L03 361 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 KCNK16Q96T55 309 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 HNRNPABQ99729 332 aaKnown RBP9.62□□□□□ -0.87
SMC4-213ENST00000472282 SMOQ99835 787 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 ZSWIM1Q9BR11 485 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 OCSTAMPQ9BR26 566 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 IER2Q9BTL4 223 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 FAM117AQ9C073 453 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 XPO4Q9C0E2 1151 aaKnown RBP9.62□□□□□ -0.87
SMC4-213ENST00000472282 RNF38Q9H0F5 515 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 RBSNQ9H1K0 784 aa9.62□□□□□ -0.87
SMC4-213ENST00000472282 LINC00597Q9H2U6 94 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms