RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 K7ESF4 209 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 PAPSS1O43252 624 aaPredicted RBP9.56□□□□□ -0.88
SYN3-211ENST00000472027 SART1O43290 800 aaKnown RBP9.56□□□□□ -0.88
SYN3-211ENST00000472027 TULP3O75386 442 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 KAT7O95251 611 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 PAPSS2O95340 614 aaPredicted RBP9.56□□□□□ -0.88
SYN3-211ENST00000472027 APODP05090 189 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 NCAM1P13591 858 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 ATP1A3P13637 1013 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 TYRP14679 529 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 CYP11B1P15538 503 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 PTMSP20962 102 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 HOXC13P31276 330 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 GRIA2P42262 883 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 ZNF165P49910 485 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 SEC13P55735 322 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 POLR2FP61218 127 aaKnown RBP9.56□□□□□ -0.88
SYN3-211ENST00000472027 UBXN1Q04323 297 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 DMWDQ09019 674 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 MESP2Q0VG99 397 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 PDCLQ13371 301 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 SYCP1Q15431 976 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 MSANTD2Q6P1R3 559 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 ZC3H14Q6PJT7 736 aaKnown RBP9.56□□□□□ -0.88
SYN3-211ENST00000472027 ASCL5Q7RTU5 278 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 SFTPA1Q8IWL2 248 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 PHTF2Q8N3S3 785 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 ZBTB44Q8NCP5 570 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 RPLP0P6Q8NHW5 317 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 CCDC26Q8TAB7 109 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 USP33Q8TEY7 942 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 ATRIPQ8WXE1 791 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 NKD2Q969F2 451 aaPredicted RBP9.56□□□□□ -0.88
SYN3-211ENST00000472027 FAM149B1Q96BN6 582 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 PPP1R13BQ96KQ4 1090 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 PCMTD1Q96MG8 357 aaPredicted RBP9.56□□□□□ -0.88
SYN3-211ENST00000472027 XPO6Q96QU8 1125 aaKnown RBP9.56□□□□□ -0.88
SYN3-211ENST00000472027 FAM126AQ9BYI3 521 aaPredicted RBP9.56□□□□□ -0.88
SYN3-211ENST00000472027 PDCL3Q9H2J4 239 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 SEMA4AQ9H3S1 761 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 ARHGEF4Q9NR80 690 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 FAM207AQ9NSI2 230 aaPredicted RBP9.56□□□□□ -0.88
SYN3-211ENST00000472027 POLR3BQ9NW08 1133 aaPredicted RBP9.56□□□□□ -0.88
SYN3-211ENST00000472027 MARK1Q9P0L2 795 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 DEC1Q9P2X7 70 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 TJP2Q9UDY2 1190 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 SLC8A2Q9UPR5 921 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 NAALADL1Q9UQQ1 740 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 SIK3Q9Y2K2 1263 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 PCDHGA2Q9Y5H1 932 aa9.56□□□□□ -0.88
SYN3-211ENST00000472027 MYO16Q9Y6X6 1858 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 SYCE3A1L190 88 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 TBC1D3BA6NDS4 549 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 F8VZ95 297 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 CAPN9O14815 690 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 TRIM24O15164 1050 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 EPHB6O15197 1021 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 MSI1O43347 362 aaKnown RBP9.55□□□□□ -0.88
SYN3-211ENST00000472027 GFRA3O60609 400 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 LILRB5O75023 590 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 TIE1P35590 1138 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 TNFRSF4P43489 277 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 FNTBP49356 437 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 HARS2P49590 506 aaKnown RBP9.55□□□□□ -0.88
SYN3-211ENST00000472027 YWHAZP63104 245 aaKnown RBP9.55□□□□□ -0.88
SYN3-211ENST00000472027 MRPS21P82921 87 aaKnown RBP9.55□□□□□ -0.88
SYN3-211ENST00000472027 KDSRQ06136 332 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 TAF5Q15542 800 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 PREPLQ4J6C6 727 aaPredicted RBP9.55□□□□□ -0.88
SYN3-211ENST00000472027 C2orf27AQ580R0 203 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 EMC10Q5UCC4 262 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 TAF3Q5VWG9 929 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 SYPL2Q5VXT5 272 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 NUDT18Q6ZVK8 323 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 BEND5Q7L4P6 421 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 SYT13Q7L8C5 426 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 NOP9Q86U38 636 aaKnown RBP9.55□□□□□ -0.88
SYN3-211ENST00000472027 CPXM2Q8N436 756 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 C1orf131Q8NDD1 294 aaKnown RBP9.55□□□□□ -0.88
SYN3-211ENST00000472027 NEK11Q8NG66 645 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 DDX1Q92499 740 aaKnown RBP9.55□□□□□ -0.88
SYN3-211ENST00000472027 BHMTQ93088 406 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 P2RY11Q96G91 374 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 NOX5Q96PH1 765 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 ERGIC2Q96RQ1 377 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 CPXM1Q96SM3 734 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 POPDC2Q9HBU9 364 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 NLRC4Q9NPP4 1024 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 DNAJC17Q9NVM6 304 aaKnown RBP9.55□□□□□ -0.88
SYN3-211ENST00000472027 PLK2Q9NYY3 685 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 DAAM1Q9Y4D1 1078 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 CEP83Q9Y592 693 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 WDFY4Q6ZS81 3184 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 ZDBF2Q9HCK1 2354 aa9.55□□□□□ -0.88
SYN3-211ENST00000472027 PRR23AA6NEV1 266 aa9.54□□□□□ -0.88
SYN3-211ENST00000472027 TEX33O43247 280 aa9.54□□□□□ -0.88
SYN3-211ENST00000472027 CACNG3O60359 315 aa9.54□□□□□ -0.88
SYN3-211ENST00000472027 GFPT2O94808 682 aa9.54□□□□□ -0.88
SYN3-211ENST00000472027 PENKP01210 267 aaPredicted RBP9.54□□□□□ -0.88
SYN3-211ENST00000472027 IGLV3-27P01718 113 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms