RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 FOXN2P32314 431 aa18.03■□□□□ 0.48
RRP1-202ENST00000471909 MLH1P40692 756 aa18.03■□□□□ 0.48
RRP1-202ENST00000471909 PPP6R3Q5H9R7 873 aaPredicted RBP18.03■□□□□ 0.48
RRP1-202ENST00000471909 HNRNPABQ99729 332 aaKnown RBP18.03■□□□□ 0.48
RRP1-202ENST00000471909 WDR83Q9BRX9 315 aaKnown RBP18.03■□□□□ 0.48
RRP1-202ENST00000471909 MAGEB5Q9BZ81 275 aa18.03■□□□□ 0.48
RRP1-202ENST00000471909 USP29Q9HBJ7 922 aa18.03■□□□□ 0.48
RRP1-202ENST00000471909 FAM105AQ9NUU6 356 aa18.03■□□□□ 0.48
RRP1-202ENST00000471909 HEY1Q9Y5J3 304 aa18.03■□□□□ 0.48
RRP1-202ENST00000471909 H7C0C1 242 aa18.03■□□□□ 0.48
RRP1-202ENST00000471909 CLDN5O00501 218 aa18.03■□□□□ 0.48
RRP1-202ENST00000471909 XPO1O14980 1071 aaKnown RBP18.03■□□□□ 0.48
RRP1-202ENST00000471909 ATP5HO75947 161 aa18.03■□□□□ 0.48
RRP1-202ENST00000471909 ATP5OP48047 213 aa18.03■□□□□ 0.48
RRP1-202ENST00000471909 ARL4CP56559 192 aa18.03■□□□□ 0.48
RRP1-202ENST00000471909 BCAR1P56945 870 aa18.03■□□□□ 0.48
RRP1-202ENST00000471909 GPX6P59796 221 aa18.03■□□□□ 0.48
RRP1-202ENST00000471909 BASP1P80723 227 aaKnown RBP18.03■□□□□ 0.48
RRP1-202ENST00000471909 PARP6Q2NL67 630 aa18.03■□□□□ 0.48
RRP1-202ENST00000471909 PIGZQ86VD9 579 aa18.03■□□□□ 0.48
RRP1-202ENST00000471909 MAML1Q92585 1016 aa18.03■□□□□ 0.48
RRP1-202ENST00000471909 UTP4Q969X6 686 aaKnown RBP18.03■□□□□ 0.48
RRP1-202ENST00000471909 FAF2Q96CS3 445 aa18.03■□□□□ 0.48
RRP1-202ENST00000471909 PAIP2Q9BPZ3 127 aaKnown RBP18.03■□□□□ 0.48
RRP1-202ENST00000471909 ZNF670Q9BS34 389 aa18.03■□□□□ 0.48
RRP1-202ENST00000471909 SENP6Q9GZR1 1112 aaPredicted RBP18.03■□□□□ 0.48
RRP1-202ENST00000471909 MYLK2Q9H1R3 596 aa18.03■□□□□ 0.48
RRP1-202ENST00000471909 TSPYL2Q9H2G4 693 aaPredicted RBP18.03■□□□□ 0.48
RRP1-202ENST00000471909 LRMDAQ9H2I8 198 aa18.03■□□□□ 0.48
RRP1-202ENST00000471909 CLUHO75153 1309 aa18.02■□□□□ 0.48
RRP1-202ENST00000471909 RASA4BC9J798 803 aa18.02■□□□□ 0.48
RRP1-202ENST00000471909 RASA4O43374 803 aa18.02■□□□□ 0.48
RRP1-202ENST00000471909 BEST1O76090 585 aa18.02■□□□□ 0.48
RRP1-202ENST00000471909 PTPN1P18031 435 aaKnown RBP18.02■□□□□ 0.48
RRP1-202ENST00000471909 TGM2P21980 687 aa18.02■□□□□ 0.48
RRP1-202ENST00000471909 L1CAMP32004 1257 aa18.02■□□□□ 0.48
RRP1-202ENST00000471909 SREBF2Q12772 1141 aa18.02■□□□□ 0.48
RRP1-202ENST00000471909 MTM1Q13496 603 aa18.02■□□□□ 0.48
RRP1-202ENST00000471909 PAQR9Q6ZVX9 377 aa18.02■□□□□ 0.48
RRP1-202ENST00000471909 NDRG1Q92597 394 aaKnown RBP18.02■□□□□ 0.48
RRP1-202ENST00000471909 ERP27Q96DN0 273 aa18.02■□□□□ 0.48
RRP1-202ENST00000471909 NAF1Q96HR8 494 aaKnown RBP18.02■□□□□ 0.48
RRP1-202ENST00000471909 GAD1Q99259 594 aa18.02■□□□□ 0.48
RRP1-202ENST00000471909 DUSP16Q9BY84 665 aa18.02■□□□□ 0.48
RRP1-202ENST00000471909 PHACTR1Q9C0D0 580 aa18.02■□□□□ 0.48
RRP1-202ENST00000471909 DNAI2Q9GZS0 605 aa18.02■□□□□ 0.48
RRP1-202ENST00000471909 UBN1Q9NPG3 1134 aa18.02■□□□□ 0.48
RRP1-202ENST00000471909 XPO7Q9UIA9 1087 aaKnown RBP18.02■□□□□ 0.48
RRP1-202ENST00000471909 FAM47DPA6NHR8 397 aa18.02■□□□□ 0.47
RRP1-202ENST00000471909 GABRDO14764 452 aa18.02■□□□□ 0.47
RRP1-202ENST00000471909 KIF3CO14782 793 aa18.02■□□□□ 0.47
RRP1-202ENST00000471909 MAP3K6O95382 1288 aa18.02■□□□□ 0.47
RRP1-202ENST00000471909 TRIM32Q13049 653 aa18.02■□□□□ 0.47
RRP1-202ENST00000471909 TMED2Q15363 201 aa18.02■□□□□ 0.47
RRP1-202ENST00000471909 DPYSL2Q16555 572 aa18.02■□□□□ 0.47
RRP1-202ENST00000471909 KIAA0319Q5VV43 1072 aa18.02■□□□□ 0.47
RRP1-202ENST00000471909 MFSD14CQ5VZR4 134 aa18.02■□□□□ 0.47
RRP1-202ENST00000471909 RSPH3Q86UC2 560 aa18.02■□□□□ 0.47
RRP1-202ENST00000471909 SERINC5Q86VE9 423 aa18.02■□□□□ 0.47
RRP1-202ENST00000471909 AGGF1Q8N302 714 aaeCLIP18.02■□□□□ 0.475e-6■■□□□ 11.6
RRP1-202ENST00000471909 RIBC1Q8N443 379 aaPredicted RBP18.02■□□□□ 0.47
RRP1-202ENST00000471909 LPPQ93052 612 aa18.02■□□□□ 0.47
RRP1-202ENST00000471909 FAM167BQ9BTA0 163 aa18.02■□□□□ 0.47
RRP1-202ENST00000471909 UPF3AQ9H1J1 476 aaKnown RBP18.02■□□□□ 0.47
RRP1-202ENST00000471909 MIOSQ9NXC5 875 aa18.02■□□□□ 0.47
RRP1-202ENST00000471909 E7ESA3 106 aa18.01■□□□□ 0.47
RRP1-202ENST00000471909 CA12O43570 354 aa18.01■□□□□ 0.47
RRP1-202ENST00000471909 PEX19P40855 299 aa18.01■□□□□ 0.47
RRP1-202ENST00000471909 ADIGQ0VDE8 80 aa18.01■□□□□ 0.47
RRP1-202ENST00000471909 TDRPQ86YL5 185 aa18.01■□□□□ 0.47
RRP1-202ENST00000471909 DHX35Q9H5Z1 703 aaKnown RBP18.01■□□□□ 0.47
RRP1-202ENST00000471909 RNPEPL1Q9HAU8 725 aa18.01■□□□□ 0.47
RRP1-202ENST00000471909 MTMR10Q9NXD2 777 aa18.01■□□□□ 0.47
RRP1-202ENST00000471909 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.01■□□□□ 0.473e-13■□□□□ 10.4
RRP1-202ENST00000471909 ZMYND8Q9ULU4 1186 aaPredicted RBP18.01■□□□□ 0.47
RRP1-202ENST00000471909 STARD13Q9Y3M8 1113 aa18.01■□□□□ 0.47
RRP1-202ENST00000471909 SCN10AQ9Y5Y9 1956 aa18.01■□□□□ 0.47
RRP1-202ENST00000471909 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.01■□□□□ 0.47
RRP1-202ENST00000471909 POC1B-GALNT4F8VUJ3 575 aa18.01■□□□□ 0.47
RRP1-202ENST00000471909 CYP2F1P24903 491 aa18.01■□□□□ 0.47
RRP1-202ENST00000471909 FLT3LGP49771 235 aa18.01■□□□□ 0.47
RRP1-202ENST00000471909 FCGRTP55899 365 aa18.01■□□□□ 0.47
RRP1-202ENST00000471909 CCDC185Q8N715 623 aa18.01■□□□□ 0.47
RRP1-202ENST00000471909 PYROXD1Q8WU10 500 aa18.01■□□□□ 0.47
RRP1-202ENST00000471909 SENP8Q96LD8 212 aa18.01■□□□□ 0.47
RRP1-202ENST00000471909 NRDE2Q9H7Z3 1164 aa18.01■□□□□ 0.47
RRP1-202ENST00000471909 AGO3Q9H9G7 860 aaKnown RBP18.01■□□□□ 0.47
RRP1-202ENST00000471909 SLC38A7Q9NVC3 462 aa18.01■□□□□ 0.47
RRP1-202ENST00000471909 AP4E1Q9UPM8 1137 aa18.01■□□□□ 0.47
RRP1-202ENST00000471909 USH1CQ9Y6N9 552 aa18.01■□□□□ 0.47
RRP1-202ENST00000471909 CEP350Q5VT06 3117 aa18■□□□□ 0.47
RRP1-202ENST00000471909 ZNF487B1APH4 448 aa18■□□□□ 0.47
RRP1-202ENST00000471909 SMAPO00193 183 aa18■□□□□ 0.47
RRP1-202ENST00000471909 KCNN4O15554 427 aa18■□□□□ 0.47
RRP1-202ENST00000471909 NPR3P17342 541 aa18■□□□□ 0.47
RRP1-202ENST00000471909 RBL1P28749 1068 aa18■□□□□ 0.47
RRP1-202ENST00000471909 SSTR1P30872 391 aa18■□□□□ 0.47
RRP1-202ENST00000471909 ABL2P42684 1182 aa18■□□□□ 0.47
RRP1-202ENST00000471909 WDR4P57081 412 aaKnown RBP18■□□□□ 0.47
RRP1-202ENST00000471909 EFHC1Q5JVL4 640 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms