RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 ORC1Q13415 861 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 TRPC3Q13507 836 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 ZNF234Q14588 700 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 PTPRNQ16849 979 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 GEN1Q17RS7 908 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 DUOXA2Q1HG44 320 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 WDR72Q3MJ13 1102 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 KCNT1Q5JUK3 1230 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 C10orf120Q5SQS8 335 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 C6orf132Q5T0Z8 1188 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 ZNF720Q7Z2F6 126 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 B3GALNT2Q8NCR0 500 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 LSM14AQ8ND56 463 aaKnown RBP7.26□□□□□ -1.25
HDAC1-204ENST00000471488 LARP4BQ92615 738 aaKnown RBP7.26□□□□□ -1.25
HDAC1-204ENST00000471488 BIRC7Q96CA5 298 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 CEP295NLQ96MC4 621 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 CBWD1Q9BRT8 395 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 ACE2Q9BYF1 805 aaPredicted RBP7.26□□□□□ -1.25
HDAC1-204ENST00000471488 SEMA4CQ9C0C4 833 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 LHX5Q9H2C1 402 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 CD248Q9HCU0 757 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 TLR8Q9NR97 1041 aaKnown RBP7.26□□□□□ -1.25
HDAC1-204ENST00000471488 KRT82Q9NSB4 513 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 LIMCH1Q9UPQ0 1083 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 TMEM131Q92545 1883 aa7.26□□□□□ -1.25
HDAC1-204ENST00000471488 B8ZZF3 427 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 H3BQV1 296 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 KLK10O43240 276 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 DKK1O94907 266 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 WISP1O95388 367 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 GRIA4P48058 902 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 PGFP49763 221 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 MAP3K7CLP57077 242 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 TMPRSS3P57727 454 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 ANAPC15P60006 121 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 RILPL1Q5EBL4 403 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 L1TD1Q5T7N2 865 aaKnown RBP7.25□□□□□ -1.25
HDAC1-204ENST00000471488 PCSK4Q6UW60 755 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 ANKS1BQ7Z6G8 1248 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 FAM35AQ86V20 835 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 GPD1LQ8N335 351 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 KIAA1958Q8N8K9 716 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 DDI1Q8WTU0 396 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 CYB5D2Q8WUJ1 264 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 OVCA2Q8WZ82 227 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 SKA1Q96BD8 255 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 ELMO3Q96BJ8 720 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 CCDC127Q96BQ5 260 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 HVCN1Q96D96 273 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 SLC6A18Q96N87 628 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 FIZ1Q96SL8 496 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 LLPHQ9BRT6 129 aaKnown RBP7.25□□□□□ -1.25
HDAC1-204ENST00000471488 KLF16Q9BXK1 252 aaPredicted RBP7.25□□□□□ -1.25
HDAC1-204ENST00000471488 FAM117AQ9C073 453 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 BTBD1Q9H0C5 482 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 DMAP1Q9NPF5 467 aaPredicted RBP7.25□□□□□ -1.25
HDAC1-204ENST00000471488 INTS13Q9NVM9 706 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 RASAL2Q9UJF2 1139 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 CLCA2Q9UQC9 943 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.25□□□□□ -1.25
HDAC1-204ENST00000471488 NFE2L3Q9Y4A8 694 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 STYXL1Q9Y6J8 313 aa7.25□□□□□ -1.25
HDAC1-204ENST00000471488 NAV2Q8IVL1 2488 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 ZNF233A6NK53 670 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 CYP26A1O43174 497 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 PCDHGA12O60330 932 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 TSPAN3O60637 253 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 CST3P01034 146 aaPredicted RBP7.24□□□□□ -1.25
HDAC1-204ENST00000471488 CYBBP04839 570 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 MPOP05164 745 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 CISD3P0C7P0 127 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 RARGP13631 454 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 C6P13671 934 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 CCDC130P13994 396 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 GARTP22102 1010 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 ADORA2BP29275 332 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 CTSKP43235 329 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 CASP5P51878 434 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 COPAP53621 1224 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 MFAP3P55082 362 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 PCBP4P57723 403 aaKnown RBP7.24□□□□□ -1.25
HDAC1-204ENST00000471488 DAB2P98082 770 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 RHDQ02161 417 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 NFATC3Q12968 1075 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 TBC1D25Q3MII6 688 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 KIAA1614Q5VZ46 1190 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 FOXR1Q6PIV2 292 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 DBX2Q6ZNG2 339 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 HTR3DQ70Z44 454 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 TRAPPC11Q7Z392 1133 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 ACOT1Q86TX2 421 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 METTL3Q86U44 580 aaKnown RBP7.24□□□□□ -1.25
HDAC1-204ENST00000471488 CBWD2Q8IUF1 395 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 KCTD17Q8N5Z5 321 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 ZNF248Q8NDW4 579 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 OR2T3Q8NH03 318 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 SNIP1Q8TAD8 396 aaKnown RBP7.24□□□□□ -1.25
HDAC1-204ENST00000471488 CXorf38Q8TB03 319 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 TSC1Q92574 1164 aa7.24□□□□□ -1.25
HDAC1-204ENST00000471488 AK8Q96MA6 479 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms