RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 CLCN4P51793 760 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 DRG2P55039 364 aaKnown RBP9.55□□□□□ -0.88
PTPRE-207ENST00000471218 YWHAZP63104 245 aaKnown RBP9.55□□□□□ -0.88
PTPRE-207ENST00000471218 SLC25A11Q02978 314 aaKnown RBP9.55□□□□□ -0.88
PTPRE-207ENST00000471218 LMNB2Q03252 620 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 ORC1Q13415 861 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 CUL1Q13616 776 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 PDK2Q15119 407 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 ANGPT1Q15389 498 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 LONRF2Q1L5Z9 754 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 SLC25A52Q3SY17 297 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 ODF2Q5BJF6 829 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 ACBD5Q5T8D3 534 aaPredicted RBP9.55□□□□□ -0.88
PTPRE-207ENST00000471218 C8orf74Q6P047 294 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 CC2D1AQ6P1N0 951 aaPredicted RBP9.55□□□□□ -0.88
PTPRE-207ENST00000471218 PIGZQ86VD9 579 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 ZNF280BQ86YH2 543 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 RNF168Q8IYW5 571 aaPredicted RBP9.55□□□□□ -0.88
PTPRE-207ENST00000471218 ARHGAP18Q8N392 663 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 NOA1Q8NC60 698 aaKnown RBP9.55□□□□□ -0.88
PTPRE-207ENST00000471218 SPPL2BQ8TCT7 592 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 CCHCR1Q8TD31 782 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 GRK7Q8WTQ7 553 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 SEC14L1Q92503 715 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 MYLPFQ96A32 169 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 C8orf48Q96LL4 319 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 KLHL5Q96PQ7 755 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 PAAF1Q9BRP4 392 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 MED10Q9BTT4 135 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 LRRC19Q9H756 370 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 WDR6Q9NNW5 1121 aaKnown RBP9.55□□□□□ -0.88
PTPRE-207ENST00000471218 METTL5Q9NRN9 209 aaKnown RBP9.55□□□□□ -0.88
PTPRE-207ENST00000471218 EHD2Q9NZN4 543 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 RASAL2Q9UJF2 1139 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 PACSIN2Q9UNF0 486 aaPredicted RBP9.55□□□□□ -0.88
PTPRE-207ENST00000471218 USP3Q9Y6I4 520 aa9.55□□□□□ -0.88
PTPRE-207ENST00000471218 EP300Q09472 2414 aaPredicted RBP9.54□□□□□ -0.88
PTPRE-207ENST00000471218 GVINP1Q7Z2Y8 2422 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 MYH10P35580 1976 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 CCDC195A0A1B0GUA6 201 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 MYBPHLA2RUH7 354 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 TMEM110-MUSTN1A8MSY1 372 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 GOLGA8SH3BPF8 625 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 PRPSAP2O60256 369 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 PHF2O75151 1096 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 GLUD1P00367 558 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 CNPP09543 421 aaKnown RBP9.54□□□□□ -0.88
PTPRE-207ENST00000471218 PYGMP11217 842 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 SRFP11831 508 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 ADORA2BP29275 332 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 GBP2P32456 591 aaPredicted RBP9.54□□□□□ -0.88
PTPRE-207ENST00000471218 HTR7P34969 479 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 NOS2P35228 1153 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 SLC11A1P49279 550 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 GPR17Q13304 367 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 KLF1Q13351 362 aaPredicted RBP9.54□□□□□ -0.88
PTPRE-207ENST00000471218 NNTQ13423 1086 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 USP41Q3LFD5 358 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 TFDP3Q5H9I0 405 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 VARS2Q5ST30 1063 aaKnown RBP9.54□□□□□ -0.88
PTPRE-207ENST00000471218 FUT10Q6P4F1 479 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 BNIPLQ7Z465 357 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 SPATA2LQ8IUW3 424 aaPredicted RBP9.54□□□□□ -0.88
PTPRE-207ENST00000471218 IFT20Q8IY31 132 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 SIX5Q8N196 739 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 C12orf76Q8N812 135 aaPredicted RBP9.54□□□□□ -0.88
PTPRE-207ENST00000471218 FAM71BQ8TC56 605 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 RXFP2Q8WXD0 754 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 PIK3R5Q8WYR1 880 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 SPATA17Q96L03 361 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 PSMB7Q99436 277 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 TTPALQ9BTX7 342 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 OSBPL8Q9BZF1 889 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 TRIM7Q9C029 511 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 RAB17Q9H0T7 212 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 FBXO44Q9H4M3 255 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 ANKZF1Q9H8Y5 726 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 PIDD1Q9HB75 910 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 POPDC2Q9HBU9 364 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 RBM12Q9NTZ6 932 aaKnown RBP9.54□□□□□ -0.88
PTPRE-207ENST00000471218 MARCH5Q9NX47 278 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 ZDHHC7Q9NXF8 308 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.54□□□□□ -0.88
PTPRE-207ENST00000471218 EPS15L1Q9UBC2 864 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 USP18Q9UMW8 372 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 PCDHB5Q9Y5E4 795 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 TSC2P49815 1807 aa9.54□□□□□ -0.88
PTPRE-207ENST00000471218 TDRD15B5MCY1 1934 aaKnown RBP9.53□□□□□ -0.88
PTPRE-207ENST00000471218 FAM92AA1XBS5 289 aa9.53□□□□□ -0.88
PTPRE-207ENST00000471218 HHLA1C9JL84 531 aa9.53□□□□□ -0.88
PTPRE-207ENST00000471218 BHMG1C9JSJ3 638 aaPredicted RBP9.53□□□□□ -0.88
PTPRE-207ENST00000471218 F8VP50 259 aa9.53□□□□□ -0.88
PTPRE-207ENST00000471218 LILRB3O75022 631 aa9.53□□□□□ -0.88
PTPRE-207ENST00000471218 ZBED1O96006 694 aa9.53□□□□□ -0.88
PTPRE-207ENST00000471218 ZFXP17010 805 aaPredicted RBP9.53□□□□□ -0.88
PTPRE-207ENST00000471218 MAGEA9P43362 315 aa9.53□□□□□ -0.88
PTPRE-207ENST00000471218 BRCC3P46736 316 aa9.53□□□□□ -0.88
PTPRE-207ENST00000471218 GLUD2P49448 558 aa9.53□□□□□ -0.88
PTPRE-207ENST00000471218 PSEN1P49768 467 aa9.53□□□□□ -0.88
PTPRE-207ENST00000471218 DAOAP59103 153 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms